Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 AC022188.1-201ENST00000620960 1664 ntBASIC16.02■□□□□ 0.15
PCDHGC4Q9Y5F7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDHGC4Q9Y5F7 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 FER1L4-210ENST00000615531 5998 ntBASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 AC074338.1-201ENST00000416825 156 ntBASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 AC136604.1-201ENST00000418535 575 ntBASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 TSPY16P-201ENST00000449843 468 ntBASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 AC135586.1-201ENST00000539323 574 ntBASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 AC004461.2-201ENST00000629517 803 ntBASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 Z97205.2-201ENST00000564697 1639 ntBASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC4Q9Y5F7 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 AC074044.1-201ENST00000609673 707 ntBASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC4Q9Y5F7 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PCDHGC4Q9Y5F7 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGC4Q9Y5F7 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGC4Q9Y5F7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHGC4Q9Y5F7 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGC4Q9Y5F7 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHGC4Q9Y5F7 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGC4Q9Y5F7 BTBD7P1-201ENST00000447253 1453 ntBASIC15.99■□□□□ 0.15
PCDHGC4Q9Y5F7 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGC4Q9Y5F7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGC4Q9Y5F7 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGC4Q9Y5F7 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGC4Q9Y5F7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
PCDHGC4Q9Y5F7 AC114501.2-201ENST00000439631 535 ntBASIC15.99■□□□□ 0.15
PCDHGC4Q9Y5F7 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGC4Q9Y5F7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms