Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 NPAP1P7-201ENST00000613027 823 ntBASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRCH1Q9Y2L9 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRCH1Q9Y2L9 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 KLF4P1-201ENST00000412782 1185 ntBASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 ACTG1P4-201ENST00000425123 1122 ntBASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 AC092329.2-201ENST00000598402 547 ntBASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.16■□□□□ 0.02
LRCH1Q9Y2L9 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms