Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 AL592424.1-201ENST00000563624 1536 ntBASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FNDC3AQ9Y2H6 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 KRT17P7-201ENST00000451704 1104 ntBASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 AC009477.1-201ENST00000452936 217 ntBASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 AC008738.7-201ENST00000609744 511 ntBASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 AC010491.1-201ENST00000563101 2797 ntBASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 AL391005.1-201ENST00000623953 2435 ntBASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
FNDC3AQ9Y2H6 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
FNDC3AQ9Y2H6 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
FNDC3AQ9Y2H6 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FNDC3AQ9Y2H6 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.27■□□□□ 0.2
FNDC3AQ9Y2H6 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
FNDC3AQ9Y2H6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FNDC3AQ9Y2H6 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FNDC3AQ9Y2H6 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FNDC3AQ9Y2H6 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
FNDC3AQ9Y2H6 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FNDC3AQ9Y2H6 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FNDC3AQ9Y2H6 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
FNDC3AQ9Y2H6 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
FNDC3AQ9Y2H6 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FNDC3AQ9Y2H6 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
FNDC3AQ9Y2H6 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FNDC3AQ9Y2H6 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
FNDC3AQ9Y2H6 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FNDC3AQ9Y2H6 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FNDC3AQ9Y2H6 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.27■□□□□ 0.2
FNDC3AQ9Y2H6 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FNDC3AQ9Y2H6 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FNDC3AQ9Y2H6 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
FNDC3AQ9Y2H6 HLA-H-201ENST00000383620 1096 ntBASIC16.27■□□□□ 0.2
FNDC3AQ9Y2H6 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
FNDC3AQ9Y2H6 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FNDC3AQ9Y2H6 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FNDC3AQ9Y2H6 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.27■□□□□ 0.2
FNDC3AQ9Y2H6 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.27■□□□□ 0.2
FNDC3AQ9Y2H6 AC009407.1-201ENST00000568958 598 ntBASIC16.27■□□□□ 0.2
FNDC3AQ9Y2H6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms