Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC004987.2-201ENST00000395959 1148 ntBASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 TTTY23B-201ENST00000442790 549 ntBASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 AC245100.5-201ENST00000452108 331 ntBASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 ELK1P1-201ENST00000485699 580 ntBASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 HILS1-202ENST00000545329 423 ntBASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 RAB43P1-201ENST00000561790 589 ntBASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 MIR6805-201ENST00000615055 62 ntBASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
SSX2IPQ9Y2D8 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 ACA64.2-201ENST00000459014 129 ntBASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 RN7SL837P-201ENST00000463010 287 ntBASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 KRT17P8-201ENST00000540749 863 ntBASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SSX2IPQ9Y2D8 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
SSX2IPQ9Y2D8 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SSX2IPQ9Y2D8 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SSX2IPQ9Y2D8 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.08■□□□□ 0.33
SSX2IPQ9Y2D8 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SSX2IPQ9Y2D8 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SSX2IPQ9Y2D8 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.08■□□□□ 0.33
SSX2IPQ9Y2D8 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SSX2IPQ9Y2D8 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
SSX2IPQ9Y2D8 AC005915.1-201ENST00000624912 2018 ntBASIC17.08■□□□□ 0.33
SSX2IPQ9Y2D8 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.08■□□□□ 0.33
SSX2IPQ9Y2D8 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SSX2IPQ9Y2D8 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SSX2IPQ9Y2D8 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.08■□□□□ 0.33
SSX2IPQ9Y2D8 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
SSX2IPQ9Y2D8 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SSX2IPQ9Y2D8 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SSX2IPQ9Y2D8 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSX2IPQ9Y2D8 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.08■□□□□ 0.32
SSX2IPQ9Y2D8 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
SSX2IPQ9Y2D8 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.08■□□□□ 0.32
SSX2IPQ9Y2D8 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.08■□□□□ 0.32
SSX2IPQ9Y2D8 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSX2IPQ9Y2D8 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.08■□□□□ 0.32
SSX2IPQ9Y2D8 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.08■□□□□ 0.32
SSX2IPQ9Y2D8 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.08■□□□□ 0.32
SSX2IPQ9Y2D8 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SSX2IPQ9Y2D8 AC007389.4-201ENST00000454674 793 ntBASIC17.08■□□□□ 0.32
SSX2IPQ9Y2D8 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.08■□□□□ 0.32
SSX2IPQ9Y2D8 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.08■□□□□ 0.32
SSX2IPQ9Y2D8 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms