Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GTF2IRD1Q9UHL9 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GTF2IRD1Q9UHL9 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GTF2IRD1Q9UHL9 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2IRD1Q9UHL9 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
GTF2IRD1Q9UHL9 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2IRD1Q9UHL9 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
GTF2IRD1Q9UHL9 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
GTF2IRD1Q9UHL9 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2IRD1Q9UHL9 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
GTF2IRD1Q9UHL9 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2IRD1Q9UHL9 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2IRD1Q9UHL9 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2IRD1Q9UHL9 C2orf27AP3-201ENST00000434123 579 ntBASIC17.31■□□□□ 0.36
GTF2IRD1Q9UHL9 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.31■□□□□ 0.36
GTF2IRD1Q9UHL9 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.31■□□□□ 0.36
GTF2IRD1Q9UHL9 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.31■□□□□ 0.36
GTF2IRD1Q9UHL9 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.31■□□□□ 0.36
GTF2IRD1Q9UHL9 DUX4L45-201ENST00000566406 1057 ntBASIC17.31■□□□□ 0.36
GTF2IRD1Q9UHL9 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2IRD1Q9UHL9 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.31■□□□□ 0.36
GTF2IRD1Q9UHL9 AL354718.3-201ENST00000616414 581 ntBASIC17.31■□□□□ 0.36
GTF2IRD1Q9UHL9 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2IRD1Q9UHL9 CR382287.1-201ENST00000623954 586 ntBASIC17.31■□□□□ 0.36
GTF2IRD1Q9UHL9 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
GTF2IRD1Q9UHL9 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
GTF2IRD1Q9UHL9 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2IRD1Q9UHL9 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2IRD1Q9UHL9 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2IRD1Q9UHL9 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GTF2IRD1Q9UHL9 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.31■□□□□ 0.36
GTF2IRD1Q9UHL9 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.31■□□□□ 0.36
GTF2IRD1Q9UHL9 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2IRD1Q9UHL9 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2IRD1Q9UHL9 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2IRD1Q9UHL9 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2IRD1Q9UHL9 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2IRD1Q9UHL9 PCDHB19P-201ENST00000570871 2371 ntBASIC17.3■□□□□ 0.36
GTF2IRD1Q9UHL9 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
GTF2IRD1Q9UHL9 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2IRD1Q9UHL9 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.3■□□□□ 0.36
GTF2IRD1Q9UHL9 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
GTF2IRD1Q9UHL9 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2IRD1Q9UHL9 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.3■□□□□ 0.36
GTF2IRD1Q9UHL9 CNN2P8-201ENST00000421872 913 ntBASIC17.3■□□□□ 0.36
GTF2IRD1Q9UHL9 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.3■□□□□ 0.36
GTF2IRD1Q9UHL9 GAPDHP40-201ENST00000505218 1006 ntBASIC17.3■□□□□ 0.36
GTF2IRD1Q9UHL9 AP001582.1-201ENST00000525856 295 ntBASIC17.3■□□□□ 0.36
GTF2IRD1Q9UHL9 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.3■□□□□ 0.36
GTF2IRD1Q9UHL9 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.3■□□□□ 0.36
GTF2IRD1Q9UHL9 AC008687.7-202ENST00000637404 953 ntBASIC17.3■□□□□ 0.36
GTF2IRD1Q9UHL9 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.3■□□□□ 0.36
GTF2IRD1Q9UHL9 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.3■□□□□ 0.36
GTF2IRD1Q9UHL9 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2IRD1Q9UHL9 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
GTF2IRD1Q9UHL9 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.3■□□□□ 0.36
GTF2IRD1Q9UHL9 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2IRD1Q9UHL9 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
GTF2IRD1Q9UHL9 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2IRD1Q9UHL9 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
GTF2IRD1Q9UHL9 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2IRD1Q9UHL9 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
GTF2IRD1Q9UHL9 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GTF2IRD1Q9UHL9 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 PFN1P12-201ENST00000455938 534 ntBASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 AC025279.2-201ENST00000569730 653 ntBASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 AC009542.2-202ENST00000619004 1067 ntBASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.29■□□□□ 0.36
GTF2IRD1Q9UHL9 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms