Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 AL162727.3-201ENST00000635661 2787 ntBASIC18.97■□□□□ 0.63
SALL1Q9NSC2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 C1QBPP1-201ENST00000400117 770 ntBASIC18.97■□□□□ 0.63
SALL1Q9NSC2 BOLA2P3-201ENST00000404566 256 ntBASIC18.97■□□□□ 0.63
SALL1Q9NSC2 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 AC026410.3-201ENST00000514280 936 ntBASIC18.97■□□□□ 0.63
SALL1Q9NSC2 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 AC015910.1-201ENST00000579400 975 ntBASIC18.97■□□□□ 0.63
SALL1Q9NSC2 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SALL1Q9NSC2 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SALL1Q9NSC2 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SALL1Q9NSC2 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SALL1Q9NSC2 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SALL1Q9NSC2 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.96■□□□□ 0.63
SALL1Q9NSC2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SALL1Q9NSC2 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SALL1Q9NSC2 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SALL1Q9NSC2 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.96■□□□□ 0.63
SALL1Q9NSC2 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.96■□□□□ 0.63
SALL1Q9NSC2 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
SALL1Q9NSC2 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.96■□□□□ 0.63
SALL1Q9NSC2 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SALL1Q9NSC2 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SALL1Q9NSC2 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SALL1Q9NSC2 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.96■□□□□ 0.63
SALL1Q9NSC2 AC132872.4-202ENST00000622924 2756 ntBASIC18.96■□□□□ 0.63
SALL1Q9NSC2 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.96■□□□□ 0.63
SALL1Q9NSC2 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.96■□□□□ 0.63
SALL1Q9NSC2 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.96■□□□□ 0.63
SALL1Q9NSC2 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SALL1Q9NSC2 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SALL1Q9NSC2 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SALL1Q9NSC2 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
SALL1Q9NSC2 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SALL1Q9NSC2 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.96■□□□□ 0.63
SALL1Q9NSC2 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.96■□□□□ 0.63
SALL1Q9NSC2 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.96■□□□□ 0.63
SALL1Q9NSC2 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.96■□□□□ 0.63
SALL1Q9NSC2 SLC25A47P1-201ENST00000531577 414 ntBASIC18.96■□□□□ 0.63
SALL1Q9NSC2 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.96■□□□□ 0.63
SALL1Q9NSC2 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.96■□□□□ 0.63
SALL1Q9NSC2 CLUHP6-201ENST00000580789 941 ntBASIC18.96■□□□□ 0.63
SALL1Q9NSC2 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.96■□□□□ 0.63
SALL1Q9NSC2 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.96■□□□□ 0.63
SALL1Q9NSC2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SALL1Q9NSC2 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.95■□□□□ 0.62
SALL1Q9NSC2 AP005117.1-202ENST00000581724 1908 ntBASIC18.95■□□□□ 0.62
SALL1Q9NSC2 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SALL1Q9NSC2 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SALL1Q9NSC2 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SALL1Q9NSC2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SALL1Q9NSC2 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
SALL1Q9NSC2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SALL1Q9NSC2 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SALL1Q9NSC2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SALL1Q9NSC2 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SALL1Q9NSC2 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
SALL1Q9NSC2 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SALL1Q9NSC2 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SALL1Q9NSC2 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SALL1Q9NSC2 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
SALL1Q9NSC2 MIR658-201ENST00000385210 100 ntBASIC18.95■□□□□ 0.62
SALL1Q9NSC2 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SALL1Q9NSC2 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SALL1Q9NSC2 AC234783.1-201ENST00000441761 496 ntBASIC18.95■□□□□ 0.62
SALL1Q9NSC2 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.95■□□□□ 0.62
SALL1Q9NSC2 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.95■□□□□ 0.62
SALL1Q9NSC2 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SALL1Q9NSC2 SNX29P1-201ENST00000548357 1007 ntBASIC18.95■□□□□ 0.62
SALL1Q9NSC2 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.95■□□□□ 0.62
SALL1Q9NSC2 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SALL1Q9NSC2 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SALL1Q9NSC2 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.95■□□□□ 0.62
SALL1Q9NSC2 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SALL1Q9NSC2 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.95■□□□□ 0.62
SALL1Q9NSC2 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SALL1Q9NSC2 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.95■□□□□ 0.62
SALL1Q9NSC2 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.95■□□□□ 0.62
SALL1Q9NSC2 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms