Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 PNN-202ENST00000553331 656 ntTSL 3 BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 AC005412.3-201ENST00000580309 715 ntBASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 AL731571.1-201ENST00000617058 5428 ntBASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC10.71□□□□□ -0.69
SND1-IT1Q9HBX3 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SND1-IT1Q9HBX3 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
SND1-IT1Q9HBX3 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SND1-IT1Q9HBX3 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC10.71□□□□□ -0.7
SND1-IT1Q9HBX3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
SND1-IT1Q9HBX3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC10.71□□□□□ -0.7
SND1-IT1Q9HBX3 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.7
SND1-IT1Q9HBX3 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SND1-IT1Q9HBX3 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
SND1-IT1Q9HBX3 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SND1-IT1Q9HBX3 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SND1-IT1Q9HBX3 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
SND1-IT1Q9HBX3 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC10.71□□□□□ -0.7
SND1-IT1Q9HBX3 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
SND1-IT1Q9HBX3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 U82695.1-201ENST00000635752 1889 ntBASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 AC104581.4-201ENST00000623126 3052 ntBASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 RBM17P3-201ENST00000417687 1192 ntBASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 MIR3180-1-201ENST00000580374 94 ntBASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 MIR3180-3-201ENST00000584616 94 ntBASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 DBP-204ENST00000599385 709 ntTSL 3 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 AC138894.3-201ENST00000603787 634 ntBASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 AC004706.3-202ENST00000621574 984 ntBASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 AC232323.1-201ENST00000540724 2099 ntBASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 REXO1L5P-201ENST00000622260 2098 ntBASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms