Protein–RNA interactions for Protein: Q9H9E3

COG4, Conserved oligomeric Golgi complex subunit 4, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COG4Q9H9E3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COG4Q9H9E3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
COG4Q9H9E3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.07■□□□□ 0.16
COG4Q9H9E3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.07■□□□□ 0.16
COG4Q9H9E3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.07■□□□□ 0.16
COG4Q9H9E3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COG4Q9H9E3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COG4Q9H9E3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COG4Q9H9E3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COG4Q9H9E3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
COG4Q9H9E3 AP003680.1-201ENST00000598970 3660 ntBASIC16.06■□□□□ 0.16
COG4Q9H9E3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
COG4Q9H9E3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
COG4Q9H9E3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COG4Q9H9E3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COG4Q9H9E3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COG4Q9H9E3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
COG4Q9H9E3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.06■□□□□ 0.16
COG4Q9H9E3 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.06■□□□□ 0.16
COG4Q9H9E3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
COG4Q9H9E3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
COG4Q9H9E3 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COG4Q9H9E3 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COG4Q9H9E3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COG4Q9H9E3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
COG4Q9H9E3 U82695.1-201ENST00000635752 1889 ntBASIC16.06■□□□□ 0.16
COG4Q9H9E3 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COG4Q9H9E3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.06■□□□□ 0.16
COG4Q9H9E3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
COG4Q9H9E3 AL592424.1-201ENST00000563624 1536 ntBASIC16.06■□□□□ 0.16
COG4Q9H9E3 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
COG4Q9H9E3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
COG4Q9H9E3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COG4Q9H9E3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COG4Q9H9E3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
COG4Q9H9E3 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
COG4Q9H9E3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
COG4Q9H9E3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.06■□□□□ 0.16
COG4Q9H9E3 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.06■□□□□ 0.16
COG4Q9H9E3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.06■□□□□ 0.16
COG4Q9H9E3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COG4Q9H9E3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COG4Q9H9E3 SPTSSB-204ENST00000617024 1292 ntBASIC16.06■□□□□ 0.16
COG4Q9H9E3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COG4Q9H9E3 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COG4Q9H9E3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
COG4Q9H9E3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
COG4Q9H9E3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COG4Q9H9E3 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
COG4Q9H9E3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COG4Q9H9E3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
COG4Q9H9E3 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.06■□□□□ 0.16
COG4Q9H9E3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COG4Q9H9E3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COG4Q9H9E3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.05■□□□□ 0.16
COG4Q9H9E3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
COG4Q9H9E3 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COG4Q9H9E3 AL589702.1-201ENST00000641229 1509 ntBASIC16.05■□□□□ 0.16
COG4Q9H9E3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COG4Q9H9E3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COG4Q9H9E3 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COG4Q9H9E3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.05■□□□□ 0.16
COG4Q9H9E3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COG4Q9H9E3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COG4Q9H9E3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
COG4Q9H9E3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COG4Q9H9E3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COG4Q9H9E3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.05■□□□□ 0.16
COG4Q9H9E3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.05■□□□□ 0.16
COG4Q9H9E3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.05■□□□□ 0.16
COG4Q9H9E3 AC098859.1-201ENST00000502915 1238 ntBASIC16.05■□□□□ 0.16
COG4Q9H9E3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COG4Q9H9E3 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.05■□□□□ 0.16
COG4Q9H9E3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.05■□□□□ 0.16
COG4Q9H9E3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.05■□□□□ 0.16
COG4Q9H9E3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.05■□□□□ 0.16
COG4Q9H9E3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COG4Q9H9E3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
COG4Q9H9E3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COG4Q9H9E3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COG4Q9H9E3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.05■□□□□ 0.16
COG4Q9H9E3 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COG4Q9H9E3 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.05■□□□□ 0.16
COG4Q9H9E3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COG4Q9H9E3 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
COG4Q9H9E3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COG4Q9H9E3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
COG4Q9H9E3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COG4Q9H9E3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COG4Q9H9E3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COG4Q9H9E3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
COG4Q9H9E3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COG4Q9H9E3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COG4Q9H9E3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.04■□□□□ 0.16
COG4Q9H9E3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COG4Q9H9E3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
COG4Q9H9E3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
COG4Q9H9E3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COG4Q9H9E3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COG4Q9H9E3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms