Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
CNTNAP4Q9C0A0 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP4Q9C0A0 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CNTNAP4Q9C0A0 FLJ38576-201ENST00000623820 2459 ntBASIC19.63■□□□□ 0.73
CNTNAP4Q9C0A0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP4Q9C0A0 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP4Q9C0A0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 AMT-224ENST00000635808 1610 ntTSL 5 BASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 NDUFAB1P1-201ENST00000404262 460 ntBASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 SPTLC1P5-201ENST00000450718 252 ntBASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 SDHD-202ENST00000525291 790 ntTSL 3 BASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 MIR4722-201ENST00000578292 60 ntBASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 ANKRD30BP2-201ENST00000435744 1610 ntBASIC19.62■□□□□ 0.73
CNTNAP4Q9C0A0 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 LSM5-207ENST00000410044 687 ntTSL 3 BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 POM121L8P-201ENST00000417732 1281 ntBASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 RGS5-214ENST00000429865 754 ntTSL 3 BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 EIF3FP3-201ENST00000434851 1086 ntBASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 POM121L9P-203ENST00000441984 1285 ntBASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 ZACNP1-201ENST00000612259 710 ntBASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 AP001505.2-201ENST00000616815 443 ntBASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 SNX1-214ENST00000625244 324 ntTSL 5 BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CNTNAP4Q9C0A0 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CNTNAP4Q9C0A0 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNTNAP4Q9C0A0 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CNTNAP4Q9C0A0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CNTNAP4Q9C0A0 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CNTNAP4Q9C0A0 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC19.6■□□□□ 0.73
CNTNAP4Q9C0A0 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CNTNAP4Q9C0A0 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CNTNAP4Q9C0A0 AC005730.2-201ENST00000564549 1184 ntBASIC19.6■□□□□ 0.73
CNTNAP4Q9C0A0 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC19.6■□□□□ 0.73
CNTNAP4Q9C0A0 MIR4706-201ENST00000582134 82 ntBASIC19.6■□□□□ 0.73
CNTNAP4Q9C0A0 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC19.6■□□□□ 0.73
CNTNAP4Q9C0A0 AC022188.1-201ENST00000620960 1664 ntBASIC19.6■□□□□ 0.73
CNTNAP4Q9C0A0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.6■□□□□ 0.73
CNTNAP4Q9C0A0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.6■□□□□ 0.73
CNTNAP4Q9C0A0 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CNTNAP4Q9C0A0 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms