Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
TRIM2Q9C040 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
TRIM2Q9C040 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.67□□□□□ -0.06
TRIM2Q9C040 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM2Q9C040 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM2Q9C040 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM2Q9C040 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM2Q9C040 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRIM2Q9C040 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
TRIM2Q9C040 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM2Q9C040 AC104640.1-201ENST00000562617 2109 ntBASIC14.66□□□□□ -0.06
TRIM2Q9C040 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM2Q9C040 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM2Q9C040 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM2Q9C040 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRIM2Q9C040 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
TRIM2Q9C040 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRIM2Q9C040 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.66□□□□□ -0.06
TRIM2Q9C040 BNIP3P1-202ENST00000550043 1585 ntBASIC14.66□□□□□ -0.06
TRIM2Q9C040 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRIM2Q9C040 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM2Q9C040 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM2Q9C040 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM2Q9C040 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
TRIM2Q9C040 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
TRIM2Q9C040 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRIM2Q9C040 METTL21AP1-201ENST00000438852 635 ntBASIC14.66□□□□□ -0.06
TRIM2Q9C040 AL139010.1-201ENST00000454878 894 ntBASIC14.66□□□□□ -0.06
TRIM2Q9C040 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
TRIM2Q9C040 AP000344.2-201ENST00000512987 629 ntBASIC14.66□□□□□ -0.06
TRIM2Q9C040 AC026979.3-201ENST00000607315 403 ntBASIC14.66□□□□□ -0.06
TRIM2Q9C040 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.66□□□□□ -0.06
TRIM2Q9C040 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM2Q9C040 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM2Q9C040 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM2Q9C040 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM2Q9C040 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM2Q9C040 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
TRIM2Q9C040 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM2Q9C040 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM2Q9C040 AC126177.1-201ENST00000547829 2218 ntBASIC14.66□□□□□ -0.06
TRIM2Q9C040 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM2Q9C040 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRIM2Q9C040 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM2Q9C040 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.66□□□□□ -0.06
TRIM2Q9C040 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRIM2Q9C040 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRIM2Q9C040 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM2Q9C040 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.65□□□□□ -0.06
TRIM2Q9C040 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM2Q9C040 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.65□□□□□ -0.06
TRIM2Q9C040 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.65□□□□□ -0.06
TRIM2Q9C040 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.65□□□□□ -0.06
TRIM2Q9C040 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.65□□□□□ -0.06
TRIM2Q9C040 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM2Q9C040 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM2Q9C040 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
TRIM2Q9C040 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM2Q9C040 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM2Q9C040 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.65□□□□□ -0.06
TRIM2Q9C040 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
TRIM2Q9C040 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM2Q9C040 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.65□□□□□ -0.06
TRIM2Q9C040 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.65□□□□□ -0.06
TRIM2Q9C040 AL592309.1-201ENST00000443127 649 ntBASIC14.65□□□□□ -0.06
TRIM2Q9C040 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM2Q9C040 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.65□□□□□ -0.06
TRIM2Q9C040 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM2Q9C040 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.65□□□□□ -0.06
TRIM2Q9C040 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM2Q9C040 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM2Q9C040 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TRIM2Q9C040 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM2Q9C040 AC084121.4-201ENST00000641598 221 ntBASIC14.65□□□□□ -0.06
TRIM2Q9C040 AF228730.8-201ENST00000642140 221 ntBASIC14.65□□□□□ -0.06
TRIM2Q9C040 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM2Q9C040 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM2Q9C040 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM2Q9C040 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM2Q9C040 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
TRIM2Q9C040 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.65□□□□□ -0.06
TRIM2Q9C040 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.65□□□□□ -0.06
TRIM2Q9C040 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM2Q9C040 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.65□□□□□ -0.06
TRIM2Q9C040 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
TRIM2Q9C040 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.65□□□□□ -0.06
TRIM2Q9C040 UXT-AS1-201ENST00000590504 1525 ntBASIC14.65□□□□□ -0.06
TRIM2Q9C040 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.65□□□□□ -0.06
TRIM2Q9C040 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TRIM2Q9C040 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM2Q9C040 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM2Q9C040 MST1L-201ENST00000442552 2185 ntBASIC14.64□□□□□ -0.07
TRIM2Q9C040 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM2Q9C040 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.64□□□□□ -0.07
TRIM2Q9C040 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM2Q9C040 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM2Q9C040 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM2Q9C040 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM2Q9C040 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM2Q9C040 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms