Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 MRPL48-201ENST00000310614 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 ANKRD36BP1-201ENST00000358576 1779 ntBASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 NFIB-219ENST00000636735 1471 ntTSL 5 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 AC009237.3-201ENST00000393279 1427 ntBASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 USP46-207ENST00000508499 1419 ntTSL 2 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-3Q9BYR6 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 RPLP1-201ENST00000260379 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 TAGAP-202ENST00000338313 1183 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 Y_RNA.9-201ENST00000362354 101 ntBASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 DYNLT3-202ENST00000378581 920 ntTSL 2 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 SMARCA2-205ENST00000382183 1178 ntTSL 5 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 EEF1GP6-201ENST00000402309 905 ntBASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 IL6-206ENST00000407492 926 ntTSL 3 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 CYP2AC1P-201ENST00000407830 1173 ntBASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 BX842568.3-201ENST00000418104 571 ntBASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 FO393414.1-201ENST00000428697 1184 ntBASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 GTF2IP3-201ENST00000433887 494 ntBASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 BX679664.2-201ENST00000439282 283 ntBASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 ZNF619P1-201ENST00000446539 752 ntBASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 HNRNPA3P5-201ENST00000455201 833 ntBASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 AZI2-207ENST00000457172 1136 ntTSL 5 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 PFN2-208ENST00000475518 637 ntTSL 2 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 PFN2-212ENST00000490975 858 ntTSL 4 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 PFN2-217ENST00000498307 556 ntTSL 4 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 PTTG3P-201ENST00000521862 606 ntBASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 CMC2-209ENST00000565108 399 ntTSL 2 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 AC113189.3-201ENST00000576615 330 ntTSL 3 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 LINC01483-205ENST00000591334 620 ntTSL 4 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 AC016629.3-202ENST00000596427 890 ntTSL 2 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 AC008737.2-201ENST00000599446 118 ntBASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 AL353807.4-201ENST00000604995 257 ntBASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 ACTR3BP1-201ENST00000605584 1247 ntBASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 AC007389.1-208ENST00000607539 512 ntTSL 4 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 Metazoa_SRP.56-201ENST00000612077 279 ntBASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 AC020917.3-201ENST00000621050 721 ntBASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 AC121247.1-201ENST00000622888 1232 ntBASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 KCTD21-AS1-207ENST00000600795 1549 ntBASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 FGL1-203ENST00000398054 1462 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
KRTAP3-3Q9BYR6 AP002001.2-201ENST00000529025 1469 ntBASIC10.15□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms