Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
LRRC3Q9BY71 AC018892.3-201ENST00000623986 2499 ntBASIC16.48■□□□□ 0.23
LRRC3Q9BY71 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 INTS4P2-202ENST00000614726 2019 ntBASIC16.48■□□□□ 0.23
LRRC3Q9BY71 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 BOLA2P3-201ENST00000404566 256 ntBASIC16.48■□□□□ 0.23
LRRC3Q9BY71 AC134915.1-201ENST00000426461 574 ntBASIC16.48■□□□□ 0.23
LRRC3Q9BY71 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 ENPP7P5-201ENST00000541031 1031 ntBASIC16.48■□□□□ 0.23
LRRC3Q9BY71 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC3Q9BY71 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.47■□□□□ 0.23
LRRC3Q9BY71 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 MIR648-201ENST00000385046 94 ntBASIC16.47■□□□□ 0.23
LRRC3Q9BY71 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 KRT223P-202ENST00000449164 1292 ntBASIC16.47■□□□□ 0.23
LRRC3Q9BY71 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 AC120045.2-201ENST00000567334 178 ntBASIC16.47■□□□□ 0.23
LRRC3Q9BY71 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 AL049840.4-201ENST00000602422 811 ntBASIC16.47■□□□□ 0.23
LRRC3Q9BY71 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC3Q9BY71 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms