Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 AP006294.1-201ENST00000415407 339 ntBASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 MYCLP2-201ENST00000449268 967 ntBASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 RPL13AP25-201ENST00000484130 612 ntBASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 AL596325.1-201ENST00000563991 1082 ntBASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 CU639417.3-201ENST00000624240 1404 ntBASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDK5RAP1Q96SZ6 AC112504.1-201ENST00000623415 1841 ntBASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 AL603832.2-201ENST00000566195 2125 ntBASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 KRT18P43-201ENST00000469825 1281 ntBASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 RN7SL399P-201ENST00000471648 279 ntBASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 AC011495.1-201ENST00000498085 584 ntBASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 AP005018.1-201ENST00000525475 301 ntBASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 CHCHD2P3-201ENST00000603038 451 ntBASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 TMEM261P1-201ENST00000604899 340 ntBASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 AC008494.3-201ENST00000606615 944 ntBASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDK5RAP1Q96SZ6 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 AC018892.3-201ENST00000623986 2499 ntBASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
CDK5RAP1Q96SZ6 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms