Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 ALG1L8P-201ENST00000533887 760 ntBASIC15.12■□□□□ 0.01
BBS4Q96RK4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.12■□□□□ 0.01
BBS4Q96RK4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.12■□□□□ 0.01
BBS4Q96RK4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
BBS4Q96RK4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BBS4Q96RK4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
BBS4Q96RK4 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
BBS4Q96RK4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BBS4Q96RK4 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.12■□□□□ 0.01
BBS4Q96RK4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
BBS4Q96RK4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BBS4Q96RK4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BBS4Q96RK4 OR2I1P-209ENST00000641730 5365 ntBASIC15.12■□□□□ 0.01
BBS4Q96RK4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.12■□□□□ 0.01
BBS4Q96RK4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
BBS4Q96RK4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BBS4Q96RK4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BBS4Q96RK4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BBS4Q96RK4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
BBS4Q96RK4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
BBS4Q96RK4 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BBS4Q96RK4 BNIP3P1-202ENST00000550043 1585 ntBASIC15.11■□□□□ 0.01
BBS4Q96RK4 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BBS4Q96RK4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
BBS4Q96RK4 C8orf49-201ENST00000525043 1968 ntBASIC15.11■□□□□ 0.01
BBS4Q96RK4 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
BBS4Q96RK4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BBS4Q96RK4 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BBS4Q96RK4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BBS4Q96RK4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
BBS4Q96RK4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.11■□□□□ 0.01
BBS4Q96RK4 AL353705.2-201ENST00000428243 662 ntBASIC15.11■□□□□ 0.01
BBS4Q96RK4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BBS4Q96RK4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BBS4Q96RK4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BBS4Q96RK4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.11■□□□□ 0.01
BBS4Q96RK4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BBS4Q96RK4 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.11■□□□□ 0.01
BBS4Q96RK4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.11■□□□□ 0.01
BBS4Q96RK4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
BBS4Q96RK4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.11■□□□□ 0.01
BBS4Q96RK4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.11■□□□□ 0.01
BBS4Q96RK4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.11■□□□□ 0.01
BBS4Q96RK4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.11■□□□□ 0.01
BBS4Q96RK4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BBS4Q96RK4 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BBS4Q96RK4 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BBS4Q96RK4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
BBS4Q96RK4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
BBS4Q96RK4 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
BBS4Q96RK4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.11■□□□□ 0.01
BBS4Q96RK4 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BBS4Q96RK4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BBS4Q96RK4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.1■□□□□ 0.01
BBS4Q96RK4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
BBS4Q96RK4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BBS4Q96RK4 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BBS4Q96RK4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BBS4Q96RK4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.1■□□□□ 0.01
BBS4Q96RK4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.1■□□□□ 0.01
BBS4Q96RK4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.1■□□□□ 0.01
BBS4Q96RK4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.1■□□□□ 0.01
BBS4Q96RK4 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
BBS4Q96RK4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BBS4Q96RK4 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.1■□□□□ 0.01
BBS4Q96RK4 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.1■□□□□ 0.01
BBS4Q96RK4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BBS4Q96RK4 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BBS4Q96RK4 AL136982.4-201ENST00000437689 1740 ntBASIC15.1■□□□□ 0.01
BBS4Q96RK4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BBS4Q96RK4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.1■□□□□ 0.01
BBS4Q96RK4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.1■□□□□ 0.01
BBS4Q96RK4 FAM58DP-201ENST00000428076 619 ntBASIC15.1■□□□□ 0.01
BBS4Q96RK4 RBPMS2P1-201ENST00000437762 623 ntBASIC15.1■□□□□ 0.01
BBS4Q96RK4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.1■□□□□ 0.01
BBS4Q96RK4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BBS4Q96RK4 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
BBS4Q96RK4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.1■□□□□ 0.01
BBS4Q96RK4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.1■□□□□ 0.01
BBS4Q96RK4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.1■□□□□ 0.01
BBS4Q96RK4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.1■□□□□ 0.01
BBS4Q96RK4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
BBS4Q96RK4 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BBS4Q96RK4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BBS4Q96RK4 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BBS4Q96RK4 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.1■□□□□ 0.01
BBS4Q96RK4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.1■□□□□ 0.01
BBS4Q96RK4 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
BBS4Q96RK4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.1■□□□□ 0.01
BBS4Q96RK4 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.1■□□□□ 0.01
BBS4Q96RK4 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.1■□□□□ 0.01
BBS4Q96RK4 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
BBS4Q96RK4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
BBS4Q96RK4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
BBS4Q96RK4 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.09■□□□□ 0.01
BBS4Q96RK4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.09■□□□□ 0.01
BBS4Q96RK4 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
BBS4Q96RK4 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.09■□□□□ 0.01
BBS4Q96RK4 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
BBS4Q96RK4 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms