Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CDCA5Q96FF9 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CDCA5Q96FF9 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.29■□□□□ 0.52
CDCA5Q96FF9 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CDCA5Q96FF9 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CDCA5Q96FF9 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDCA5Q96FF9 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.29■□□□□ 0.52
CDCA5Q96FF9 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDCA5Q96FF9 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDCA5Q96FF9 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDCA5Q96FF9 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC18.29■□□□□ 0.52
CDCA5Q96FF9 Z97180.1-201ENST00000445173 988 ntBASIC18.29■□□□□ 0.52
CDCA5Q96FF9 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC18.29■□□□□ 0.52
CDCA5Q96FF9 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC18.29■□□□□ 0.52
CDCA5Q96FF9 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC18.29■□□□□ 0.52
CDCA5Q96FF9 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDCA5Q96FF9 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC18.29■□□□□ 0.52
CDCA5Q96FF9 AC005730.2-201ENST00000564549 1184 ntBASIC18.29■□□□□ 0.52
CDCA5Q96FF9 RN7SL774P-201ENST00000577467 290 ntBASIC18.29■□□□□ 0.52
CDCA5Q96FF9 PPY2P-201ENST00000582808 702 ntBASIC18.29■□□□□ 0.52
CDCA5Q96FF9 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDCA5Q96FF9 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CDCA5Q96FF9 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDCA5Q96FF9 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.29■□□□□ 0.52
CDCA5Q96FF9 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDCA5Q96FF9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDCA5Q96FF9 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CDCA5Q96FF9 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.29■□□□□ 0.52
CDCA5Q96FF9 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CDCA5Q96FF9 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CDCA5Q96FF9 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDCA5Q96FF9 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.29■□□□□ 0.52
CDCA5Q96FF9 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDCA5Q96FF9 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDCA5Q96FF9 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
CDCA5Q96FF9 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
CDCA5Q96FF9 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CDCA5Q96FF9 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC18.28■□□□□ 0.52
CDCA5Q96FF9 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC18.28■□□□□ 0.52
CDCA5Q96FF9 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.28■□□□□ 0.52
CDCA5Q96FF9 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDCA5Q96FF9 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDCA5Q96FF9 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDCA5Q96FF9 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC18.28■□□□□ 0.52
CDCA5Q96FF9 RPL17P11-201ENST00000417593 544 ntBASIC18.28■□□□□ 0.52
CDCA5Q96FF9 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC18.28■□□□□ 0.52
CDCA5Q96FF9 FAM8A4P-201ENST00000435433 1213 ntBASIC18.28■□□□□ 0.52
CDCA5Q96FF9 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC18.28■□□□□ 0.52
CDCA5Q96FF9 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.28■□□□□ 0.52
CDCA5Q96FF9 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDCA5Q96FF9 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
CDCA5Q96FF9 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC18.28■□□□□ 0.52
CDCA5Q96FF9 RN7SL574P-201ENST00000581512 297 ntBASIC18.28■□□□□ 0.52
CDCA5Q96FF9 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CDCA5Q96FF9 AC091544.8-201ENST00000619490 361 ntBASIC18.28■□□□□ 0.52
CDCA5Q96FF9 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDCA5Q96FF9 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CDCA5Q96FF9 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDCA5Q96FF9 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CDCA5Q96FF9 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDCA5Q96FF9 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDCA5Q96FF9 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDCA5Q96FF9 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDCA5Q96FF9 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDCA5Q96FF9 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.28■□□□□ 0.52
CDCA5Q96FF9 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDCA5Q96FF9 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDCA5Q96FF9 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDCA5Q96FF9 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDCA5Q96FF9 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
CDCA5Q96FF9 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDCA5Q96FF9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
CDCA5Q96FF9 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDCA5Q96FF9 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDCA5Q96FF9 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDCA5Q96FF9 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC18.27■□□□□ 0.52
CDCA5Q96FF9 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC18.27■□□□□ 0.52
CDCA5Q96FF9 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC18.27■□□□□ 0.52
CDCA5Q96FF9 EEF1DP6-201ENST00000449232 372 ntBASIC18.27■□□□□ 0.52
CDCA5Q96FF9 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC18.27■□□□□ 0.52
CDCA5Q96FF9 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC18.27■□□□□ 0.52
CDCA5Q96FF9 SUPT4H1P2-201ENST00000501248 353 ntBASIC18.27■□□□□ 0.52
CDCA5Q96FF9 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDCA5Q96FF9 PRKXP1-201ENST00000561423 1122 ntBASIC18.27■□□□□ 0.52
CDCA5Q96FF9 AL133499.1-201ENST00000596207 608 ntBASIC18.27■□□□□ 0.52
CDCA5Q96FF9 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.27■□□□□ 0.52
CDCA5Q96FF9 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC18.27■□□□□ 0.52
CDCA5Q96FF9 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CDCA5Q96FF9 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDCA5Q96FF9 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDCA5Q96FF9 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDCA5Q96FF9 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.27■□□□□ 0.52
CDCA5Q96FF9 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDCA5Q96FF9 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CDCA5Q96FF9 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDCA5Q96FF9 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CDCA5Q96FF9 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CDCA5Q96FF9 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDCA5Q96FF9 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
CDCA5Q96FF9 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms