Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.71■□□□□ 0.11
TTC28Q96AY4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.71■□□□□ 0.11
TTC28Q96AY4 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TTC28Q96AY4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.71■□□□□ 0.11
TTC28Q96AY4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TTC28Q96AY4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TTC28Q96AY4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TTC28Q96AY4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.71■□□□□ 0.11
TTC28Q96AY4 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TTC28Q96AY4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
TTC28Q96AY4 HIST2H2BA-201ENST00000412169 381 ntBASIC15.71■□□□□ 0.11
TTC28Q96AY4 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC15.71■□□□□ 0.11
TTC28Q96AY4 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC15.71■□□□□ 0.11
TTC28Q96AY4 AREG-202ENST00000502307 956 ntTSL 5 BASIC15.71■□□□□ 0.11
TTC28Q96AY4 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.71■□□□□ 0.11
TTC28Q96AY4 GDNF-207ENST00000515058 764 ntTSL 5 BASIC15.71■□□□□ 0.11
TTC28Q96AY4 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC15.71■□□□□ 0.11
TTC28Q96AY4 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TTC28Q96AY4 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TTC28Q96AY4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.71■□□□□ 0.11
TTC28Q96AY4 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC15.71■□□□□ 0.11
TTC28Q96AY4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TTC28Q96AY4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.71■□□□□ 0.11
TTC28Q96AY4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.71■□□□□ 0.11
TTC28Q96AY4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TTC28Q96AY4 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TTC28Q96AY4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TTC28Q96AY4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TTC28Q96AY4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TTC28Q96AY4 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TTC28Q96AY4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.71■□□□□ 0.1
TTC28Q96AY4 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TTC28Q96AY4 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC15.71■□□□□ 0.1
TTC28Q96AY4 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TTC28Q96AY4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
TTC28Q96AY4 LINC00634-202ENST00000505157 222 ntBASIC15.71■□□□□ 0.1
TTC28Q96AY4 AP000911.2-201ENST00000534330 502 ntBASIC15.71■□□□□ 0.1
TTC28Q96AY4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.71■□□□□ 0.1
TTC28Q96AY4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TTC28Q96AY4 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
TTC28Q96AY4 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
TTC28Q96AY4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TTC28Q96AY4 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TTC28Q96AY4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TTC28Q96AY4 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TTC28Q96AY4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TTC28Q96AY4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TTC28Q96AY4 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TTC28Q96AY4 MIR557-201ENST00000385239 98 ntBASIC15.7■□□□□ 0.1
TTC28Q96AY4 ACTBP8-201ENST00000403258 1108 ntBASIC15.7■□□□□ 0.1
TTC28Q96AY4 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TTC28Q96AY4 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TTC28Q96AY4 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TTC28Q96AY4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TTC28Q96AY4 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC15.7■□□□□ 0.1
TTC28Q96AY4 MIR3677-201ENST00000578964 60 ntBASIC15.7■□□□□ 0.1
TTC28Q96AY4 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
TTC28Q96AY4 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC15.7■□□□□ 0.1
TTC28Q96AY4 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TTC28Q96AY4 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TTC28Q96AY4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TTC28Q96AY4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.7■□□□□ 0.1
TTC28Q96AY4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TTC28Q96AY4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TTC28Q96AY4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TTC28Q96AY4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TTC28Q96AY4 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TTC28Q96AY4 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TTC28Q96AY4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TTC28Q96AY4 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.7■□□□□ 0.1
TTC28Q96AY4 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC15.7■□□□□ 0.1
TTC28Q96AY4 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.7■□□□□ 0.1
TTC28Q96AY4 POLD4-208ENST00000532830 904 ntTSL 3 BASIC15.7■□□□□ 0.1
TTC28Q96AY4 AC009779.1-201ENST00000551138 283 ntBASIC15.7■□□□□ 0.1
TTC28Q96AY4 CR383656.3-201ENST00000551315 183 ntBASIC15.7■□□□□ 0.1
TTC28Q96AY4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
TTC28Q96AY4 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.7■□□□□ 0.1
TTC28Q96AY4 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TTC28Q96AY4 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TTC28Q96AY4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TTC28Q96AY4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TTC28Q96AY4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TTC28Q96AY4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TTC28Q96AY4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TTC28Q96AY4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.69■□□□□ 0.1
TTC28Q96AY4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TTC28Q96AY4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TTC28Q96AY4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TTC28Q96AY4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TTC28Q96AY4 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TTC28Q96AY4 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TTC28Q96AY4 RN7SL258P-201ENST00000478664 300 ntBASIC15.69■□□□□ 0.1
TTC28Q96AY4 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TTC28Q96AY4 RN7SL470P-201ENST00000583069 259 ntBASIC15.69■□□□□ 0.1
TTC28Q96AY4 AC055811.3-201ENST00000584952 686 ntBASIC15.69■□□□□ 0.1
TTC28Q96AY4 MIR6125-201ENST00000618986 96 ntBASIC15.69■□□□□ 0.1
TTC28Q96AY4 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC15.69■□□□□ 0.1
TTC28Q96AY4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.69■□□□□ 0.1
TTC28Q96AY4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TTC28Q96AY4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms