Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RFT1Q96AA3 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.15□□□□□ -0.14
RFT1Q96AA3 AC232323.1-201ENST00000540724 2099 ntBASIC14.15□□□□□ -0.14
RFT1Q96AA3 REXO1L5P-201ENST00000622260 2098 ntBASIC14.15□□□□□ -0.14
RFT1Q96AA3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RFT1Q96AA3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RFT1Q96AA3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.15□□□□□ -0.14
RFT1Q96AA3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.15□□□□□ -0.14
RFT1Q96AA3 AC018712.1-201ENST00000455767 687 ntBASIC14.15□□□□□ -0.14
RFT1Q96AA3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
RFT1Q96AA3 AF186996.4-201ENST00000467186 377 ntBASIC14.15□□□□□ -0.14
RFT1Q96AA3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.15□□□□□ -0.14
RFT1Q96AA3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.15□□□□□ -0.14
RFT1Q96AA3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.15□□□□□ -0.14
RFT1Q96AA3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.15□□□□□ -0.14
RFT1Q96AA3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.15□□□□□ -0.14
RFT1Q96AA3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.15□□□□□ -0.14
RFT1Q96AA3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.15□□□□□ -0.14
RFT1Q96AA3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RFT1Q96AA3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RFT1Q96AA3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RFT1Q96AA3 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
RFT1Q96AA3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RFT1Q96AA3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.15□□□□□ -0.14
RFT1Q96AA3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.15□□□□□ -0.14
RFT1Q96AA3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.15□□□□□ -0.14
RFT1Q96AA3 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RFT1Q96AA3 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
RFT1Q96AA3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.15□□□□□ -0.14
RFT1Q96AA3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.15□□□□□ -0.15
RFT1Q96AA3 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
RFT1Q96AA3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
RFT1Q96AA3 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFT1Q96AA3 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFT1Q96AA3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
RFT1Q96AA3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RFT1Q96AA3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RFT1Q96AA3 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RFT1Q96AA3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
RFT1Q96AA3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.14□□□□□ -0.15
RFT1Q96AA3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RFT1Q96AA3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.14□□□□□ -0.15
RFT1Q96AA3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
RFT1Q96AA3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFT1Q96AA3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFT1Q96AA3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RFT1Q96AA3 AC092910.1-201ENST00000482027 1129 ntBASIC14.14□□□□□ -0.15
RFT1Q96AA3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.14□□□□□ -0.15
RFT1Q96AA3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.14□□□□□ -0.15
RFT1Q96AA3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RFT1Q96AA3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.14□□□□□ -0.15
RFT1Q96AA3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.14□□□□□ -0.15
RFT1Q96AA3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.14□□□□□ -0.15
RFT1Q96AA3 OR7E47P-204ENST00000575924 449 ntBASIC14.14□□□□□ -0.15
RFT1Q96AA3 MIR4751-201ENST00000578027 74 ntBASIC14.14□□□□□ -0.15
RFT1Q96AA3 AL121912.1-201ENST00000603683 238 ntBASIC14.14□□□□□ -0.15
RFT1Q96AA3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RFT1Q96AA3 AC020765.3-201ENST00000613051 740 ntBASIC14.14□□□□□ -0.15
RFT1Q96AA3 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
RFT1Q96AA3 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RFT1Q96AA3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.14□□□□□ -0.15
RFT1Q96AA3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
RFT1Q96AA3 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFT1Q96AA3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.14□□□□□ -0.15
RFT1Q96AA3 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFT1Q96AA3 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFT1Q96AA3 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFT1Q96AA3 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.14□□□□□ -0.15
RFT1Q96AA3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RFT1Q96AA3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.14□□□□□ -0.15
RFT1Q96AA3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RFT1Q96AA3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.14□□□□□ -0.15
RFT1Q96AA3 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.14□□□□□ -0.15
RFT1Q96AA3 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.14□□□□□ -0.15
RFT1Q96AA3 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFT1Q96AA3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RFT1Q96AA3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RFT1Q96AA3 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RFT1Q96AA3 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
RFT1Q96AA3 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
RFT1Q96AA3 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.13□□□□□ -0.15
RFT1Q96AA3 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
RFT1Q96AA3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RFT1Q96AA3 AC005622.1-201ENST00000636801 1703 ntBASIC14.13□□□□□ -0.15
RFT1Q96AA3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RFT1Q96AA3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
RFT1Q96AA3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RFT1Q96AA3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
RFT1Q96AA3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RFT1Q96AA3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.13□□□□□ -0.15
RFT1Q96AA3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RFT1Q96AA3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RFT1Q96AA3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
RFT1Q96AA3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RFT1Q96AA3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RFT1Q96AA3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
RFT1Q96AA3 KRT18P67-201ENST00000432816 1264 ntBASIC14.13□□□□□ -0.15
RFT1Q96AA3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.13□□□□□ -0.15
RFT1Q96AA3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.13□□□□□ -0.15
RFT1Q96AA3 AC079781.3-201ENST00000449110 356 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms