Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.68■□□□□ 0.58
BRF1Q92994 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BRF1Q92994 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.68■□□□□ 0.58
BRF1Q92994 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.68■□□□□ 0.58
BRF1Q92994 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.68■□□□□ 0.58
BRF1Q92994 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.68■□□□□ 0.58
BRF1Q92994 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.68■□□□□ 0.58
BRF1Q92994 AL589739.1-201ENST00000607720 493 ntBASIC18.68■□□□□ 0.58
BRF1Q92994 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRF1Q92994 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
BRF1Q92994 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRF1Q92994 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRF1Q92994 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.68■□□□□ 0.58
BRF1Q92994 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.68■□□□□ 0.58
BRF1Q92994 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.68■□□□□ 0.58
BRF1Q92994 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRF1Q92994 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRF1Q92994 FER1L4-210ENST00000615531 5998 ntBASIC18.68■□□□□ 0.58
BRF1Q92994 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BRF1Q92994 AL607033.1-201ENST00000623900 1599 ntBASIC18.68■□□□□ 0.58
BRF1Q92994 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BRF1Q92994 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BRF1Q92994 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
BRF1Q92994 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.67■□□□□ 0.58
BRF1Q92994 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.67■□□□□ 0.58
BRF1Q92994 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BRF1Q92994 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BRF1Q92994 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRF1Q92994 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRF1Q92994 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
BRF1Q92994 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRF1Q92994 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
BRF1Q92994 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRF1Q92994 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.67■□□□□ 0.58
BRF1Q92994 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.67■□□□□ 0.58
BRF1Q92994 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRF1Q92994 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRF1Q92994 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRF1Q92994 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
BRF1Q92994 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRF1Q92994 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRF1Q92994 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.67■□□□□ 0.58
BRF1Q92994 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.67■□□□□ 0.58
BRF1Q92994 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.67■□□□□ 0.58
BRF1Q92994 AC004449.1-201ENST00000564240 433 ntBASIC18.67■□□□□ 0.58
BRF1Q92994 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.67■□□□□ 0.58
BRF1Q92994 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.67■□□□□ 0.58
BRF1Q92994 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
BRF1Q92994 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRF1Q92994 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
BRF1Q92994 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRF1Q92994 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRF1Q92994 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BRF1Q92994 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRF1Q92994 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRF1Q92994 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRF1Q92994 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BRF1Q92994 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRF1Q92994 AC087481.3-201ENST00000602886 1894 ntBASIC18.67■□□□□ 0.58
BRF1Q92994 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BRF1Q92994 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.67■□□□□ 0.58
BRF1Q92994 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRF1Q92994 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRF1Q92994 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.66■□□□□ 0.58
BRF1Q92994 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRF1Q92994 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.66■□□□□ 0.58
BRF1Q92994 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRF1Q92994 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRF1Q92994 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRF1Q92994 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRF1Q92994 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.66■□□□□ 0.58
BRF1Q92994 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRF1Q92994 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BRF1Q92994 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRF1Q92994 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.66■□□□□ 0.58
BRF1Q92994 AC127383.1-201ENST00000444697 1800 ntBASIC18.66■□□□□ 0.58
BRF1Q92994 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.66■□□□□ 0.58
BRF1Q92994 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
BRF1Q92994 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
BRF1Q92994 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
BRF1Q92994 AL080243.2-201ENST00000418783 582 ntBASIC18.66■□□□□ 0.58
BRF1Q92994 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
BRF1Q92994 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.66■□□□□ 0.58
BRF1Q92994 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.66■□□□□ 0.58
BRF1Q92994 AC093028.1-201ENST00000622998 982 ntBASIC18.66■□□□□ 0.58
BRF1Q92994 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRF1Q92994 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRF1Q92994 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BRF1Q92994 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BRF1Q92994 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.66■□□□□ 0.58
BRF1Q92994 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRF1Q92994 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
BRF1Q92994 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.66■□□□□ 0.58
BRF1Q92994 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.66■□□□□ 0.58
BRF1Q92994 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRF1Q92994 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.66■□□□□ 0.58
BRF1Q92994 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRF1Q92994 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.65■□□□□ 0.58
BRF1Q92994 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.65■□□□□ 0.58
BRF1Q92994 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms