Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
STAG1Q8WVM7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
STAG1Q8WVM7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
STAG1Q8WVM7 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
STAG1Q8WVM7 AP003680.1-201ENST00000598970 3660 ntBASIC18.62■□□□□ 0.57
STAG1Q8WVM7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
STAG1Q8WVM7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
STAG1Q8WVM7 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
STAG1Q8WVM7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
STAG1Q8WVM7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
STAG1Q8WVM7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
STAG1Q8WVM7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
STAG1Q8WVM7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
STAG1Q8WVM7 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
STAG1Q8WVM7 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
STAG1Q8WVM7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
STAG1Q8WVM7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
STAG1Q8WVM7 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
STAG1Q8WVM7 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.61■□□□□ 0.57
STAG1Q8WVM7 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
STAG1Q8WVM7 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
STAG1Q8WVM7 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
STAG1Q8WVM7 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
STAG1Q8WVM7 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.61■□□□□ 0.57
STAG1Q8WVM7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
STAG1Q8WVM7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
STAG1Q8WVM7 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
STAG1Q8WVM7 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
STAG1Q8WVM7 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
STAG1Q8WVM7 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.61■□□□□ 0.57
STAG1Q8WVM7 DFFBP1-201ENST00000433250 979 ntBASIC18.61■□□□□ 0.57
STAG1Q8WVM7 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.61■□□□□ 0.57
STAG1Q8WVM7 AL596325.1-201ENST00000563991 1082 ntBASIC18.61■□□□□ 0.57
STAG1Q8WVM7 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.61■□□□□ 0.57
STAG1Q8WVM7 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
STAG1Q8WVM7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.61■□□□□ 0.57
STAG1Q8WVM7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
STAG1Q8WVM7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.61■□□□□ 0.57
STAG1Q8WVM7 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
STAG1Q8WVM7 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 CICP13-201ENST00000422015 2789 ntBASIC18.6■□□□□ 0.57
STAG1Q8WVM7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 AC138969.3-201ENST00000546612 1459 ntBASIC18.6■□□□□ 0.57
STAG1Q8WVM7 AC138932.2-201ENST00000548268 1459 ntBASIC18.6■□□□□ 0.57
STAG1Q8WVM7 AC126755.4-201ENST00000549796 1459 ntBASIC18.6■□□□□ 0.57
STAG1Q8WVM7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 GAPDHP21-201ENST00000450301 1010 ntBASIC18.6■□□□□ 0.57
STAG1Q8WVM7 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 PRAL-201ENST00000624952 3286 ntBASIC18.6■□□□□ 0.57
STAG1Q8WVM7 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
STAG1Q8WVM7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
STAG1Q8WVM7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.59■□□□□ 0.57
STAG1Q8WVM7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.59■□□□□ 0.57
STAG1Q8WVM7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
STAG1Q8WVM7 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
STAG1Q8WVM7 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
STAG1Q8WVM7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.59■□□□□ 0.57
STAG1Q8WVM7 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
STAG1Q8WVM7 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
STAG1Q8WVM7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
STAG1Q8WVM7 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.59■□□□□ 0.57
STAG1Q8WVM7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
STAG1Q8WVM7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
STAG1Q8WVM7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.59■□□□□ 0.57
STAG1Q8WVM7 SLC7A15P-201ENST00000424028 1363 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms