Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 AC025048.3-201ENST00000590609 569 ntBASIC16.8■□□□□ 0.28
UBA3Q8TBC4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 AC005702.4-201ENST00000618393 416 ntBASIC16.8■□□□□ 0.28
UBA3Q8TBC4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 AC092850.2-201ENST00000623821 2697 ntBASIC16.8■□□□□ 0.28
UBA3Q8TBC4 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
UBA3Q8TBC4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBA3Q8TBC4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBA3Q8TBC4 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.79■□□□□ 0.28
UBA3Q8TBC4 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBA3Q8TBC4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
UBA3Q8TBC4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBA3Q8TBC4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.79■□□□□ 0.28
UBA3Q8TBC4 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.79■□□□□ 0.28
UBA3Q8TBC4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBA3Q8TBC4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBA3Q8TBC4 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBA3Q8TBC4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.79■□□□□ 0.28
UBA3Q8TBC4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBA3Q8TBC4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBA3Q8TBC4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBA3Q8TBC4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBA3Q8TBC4 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.79■□□□□ 0.28
UBA3Q8TBC4 AC009477.1-201ENST00000452936 217 ntBASIC16.79■□□□□ 0.28
UBA3Q8TBC4 UGT1A2P-201ENST00000454886 866 ntBASIC16.79■□□□□ 0.28
UBA3Q8TBC4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.79■□□□□ 0.28
UBA3Q8TBC4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.79■□□□□ 0.28
UBA3Q8TBC4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.79■□□□□ 0.28
UBA3Q8TBC4 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.79■□□□□ 0.28
UBA3Q8TBC4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBA3Q8TBC4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.79■□□□□ 0.28
UBA3Q8TBC4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
UBA3Q8TBC4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
UBA3Q8TBC4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBA3Q8TBC4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.79■□□□□ 0.28
UBA3Q8TBC4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBA3Q8TBC4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
UBA3Q8TBC4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBA3Q8TBC4 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBA3Q8TBC4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBA3Q8TBC4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.79■□□□□ 0.28
UBA3Q8TBC4 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.79■□□□□ 0.28
UBA3Q8TBC4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBA3Q8TBC4 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 MRPS18AP1-201ENST00000414458 589 ntBASIC16.78■□□□□ 0.28
UBA3Q8TBC4 AC074338.1-201ENST00000416825 156 ntBASIC16.78■□□□□ 0.28
UBA3Q8TBC4 AC136604.1-201ENST00000418535 575 ntBASIC16.78■□□□□ 0.28
UBA3Q8TBC4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 INGX-202ENST00000489074 768 ntBASIC16.78■□□□□ 0.28
UBA3Q8TBC4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.78■□□□□ 0.28
UBA3Q8TBC4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms