Protein–RNA interactions for Protein: Q8TAT5

NEIL3, Endonuclease 8-like 3, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3Q8TAT5 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NEIL3Q8TAT5 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NEIL3Q8TAT5 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NEIL3Q8TAT5 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NEIL3Q8TAT5 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.83□□□□□ -0.04
NEIL3Q8TAT5 FO538757.1-201ENST00000623083 1397 ntBASIC14.83□□□□□ -0.04
NEIL3Q8TAT5 AL031731.1-201ENST00000642131 2094 ntBASIC14.83□□□□□ -0.04
NEIL3Q8TAT5 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.83□□□□□ -0.04
NEIL3Q8TAT5 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.83□□□□□ -0.04
NEIL3Q8TAT5 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 TREML5P-201ENST00000421694 576 ntBASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 IGHV3-42-201ENST00000520410 361 ntBASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 AC007967.4-201ENST00000614700 386 ntBASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 AP005117.1-202ENST00000581724 1908 ntBASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.82□□□□□ -0.04
NEIL3Q8TAT5 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 AC093724.1-201ENST00000448659 1027 ntBASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 LINC02228-204ENST00000642115 2962 ntBASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
NEIL3Q8TAT5 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms