Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 AC023157.3-201ENST00000619086 2088 ntBASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 AC092902.6-201ENST00000641783 218 ntBASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLHC1Q8NHS4 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 AKAP8P1-201ENST00000434743 1349 ntBASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 AL109954.1-202ENST00000564051 2148 ntBASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLHC1Q8NHS4 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.28■□□□□ 0.04
CLHC1Q8NHS4 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CLHC1Q8NHS4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.28■□□□□ 0.04
CLHC1Q8NHS4 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLHC1Q8NHS4 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLHC1Q8NHS4 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.28■□□□□ 0.04
CLHC1Q8NHS4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.28■□□□□ 0.04
CLHC1Q8NHS4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.28■□□□□ 0.04
CLHC1Q8NHS4 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.28■□□□□ 0.04
CLHC1Q8NHS4 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLHC1Q8NHS4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLHC1Q8NHS4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms