Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 NEU3-205ENST00000531619 582 ntTSL 5 BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 BNIP3P1-202ENST00000550043 1585 ntBASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 AL691432.1-201ENST00000596308 1422 ntBASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 PPY2P-201ENST00000582808 702 ntBASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 REXO1L1P-202ENST00000608646 1974 ntBASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 PCGF3-213ENST00000620529 1899 ntBASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 AC134043.2-201ENST00000624206 2238 ntBASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 LETM1P2-201ENST00000597330 2178 ntBASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 AC026316.1-201ENST00000398900 414 ntBASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 AC022748.3-201ENST00000621828 275 ntBASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCDC168Q8NDH2 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 UBALD1-205ENST00000590891 2641 ntBASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 NOC2LP1-201ENST00000450578 752 ntBASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 AC015910.1-201ENST00000579400 975 ntBASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 AL008707.1-201ENST00000422498 534 ntBASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 RN7SL11P-201ENST00000471305 293 ntBASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 AC132938.4-201ENST00000623835 848 ntBASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCDC168Q8NDH2 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms