Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.01□□□□□ -0.17
ZIC4Q8N9L1 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ZIC4Q8N9L1 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
ZIC4Q8N9L1 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZIC4Q8N9L1 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
ZIC4Q8N9L1 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ZIC4Q8N9L1 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
ZIC4Q8N9L1 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14□□□□□ -0.17
ZIC4Q8N9L1 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZIC4Q8N9L1 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZIC4Q8N9L1 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
ZIC4Q8N9L1 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ZIC4Q8N9L1 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZIC4Q8N9L1 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
ZIC4Q8N9L1 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
ZIC4Q8N9L1 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZIC4Q8N9L1 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14□□□□□ -0.17
ZIC4Q8N9L1 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZIC4Q8N9L1 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZIC4Q8N9L1 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14□□□□□ -0.17
ZIC4Q8N9L1 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
ZIC4Q8N9L1 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZIC4Q8N9L1 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14□□□□□ -0.17
ZIC4Q8N9L1 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14□□□□□ -0.17
ZIC4Q8N9L1 BCRP1-201ENST00000444246 691 ntBASIC14□□□□□ -0.17
ZIC4Q8N9L1 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ZIC4Q8N9L1 SPDYE18-201ENST00000510091 1050 ntBASIC14□□□□□ -0.17
ZIC4Q8N9L1 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14□□□□□ -0.17
ZIC4Q8N9L1 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14□□□□□ -0.17
ZIC4Q8N9L1 AC092337.1-201ENST00000568699 1129 ntBASIC14□□□□□ -0.17
ZIC4Q8N9L1 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14□□□□□ -0.17
ZIC4Q8N9L1 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14□□□□□ -0.17
ZIC4Q8N9L1 AJ011932.1-201ENST00000621707 465 ntBASIC14□□□□□ -0.17
ZIC4Q8N9L1 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14□□□□□ -0.17
ZIC4Q8N9L1 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ZIC4Q8N9L1 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
ZIC4Q8N9L1 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZIC4Q8N9L1 AC009090.5-201ENST00000624886 2285 ntBASIC14□□□□□ -0.17
ZIC4Q8N9L1 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZIC4Q8N9L1 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZIC4Q8N9L1 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
ZIC4Q8N9L1 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZIC4Q8N9L1 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZIC4Q8N9L1 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZIC4Q8N9L1 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14□□□□□ -0.17
ZIC4Q8N9L1 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14□□□□□ -0.17
ZIC4Q8N9L1 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
ZIC4Q8N9L1 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14□□□□□ -0.17
ZIC4Q8N9L1 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14□□□□□ -0.17
ZIC4Q8N9L1 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 AC020658.6-201ENST00000623564 1870 ntBASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 TOMM22P5-201ENST00000416399 439 ntBASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 HMGN1P19-201ENST00000436976 333 ntBASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 AL589987.1-201ENST00000453380 819 ntBASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 SLED1-202ENST00000512051 380 ntBASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 SRD5A3P1-201ENST00000603021 949 ntBASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 AC004790.1-201ENST00000612686 536 ntBASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 CICP6-201ENST00000457191 2729 ntBASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC4Q8N9L1 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms