Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 MTDHP5-201ENST00000598980 586 ntBASIC18.68■□□□□ 0.58
CCDC83Q8IWF9 AL450472.2-201ENST00000603663 1156 ntBASIC18.68■□□□□ 0.58
CCDC83Q8IWF9 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.68■□□□□ 0.58
CCDC83Q8IWF9 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CCDC83Q8IWF9 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC83Q8IWF9 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC83Q8IWF9 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC83Q8IWF9 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC83Q8IWF9 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC83Q8IWF9 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC83Q8IWF9 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC83Q8IWF9 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC83Q8IWF9 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC83Q8IWF9 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
CCDC83Q8IWF9 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CCDC83Q8IWF9 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC83Q8IWF9 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC83Q8IWF9 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CCDC83Q8IWF9 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC83Q8IWF9 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 RARRES2P9-201ENST00000565168 469 ntBASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 AC084121.4-201ENST00000641598 221 ntBASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 AF228730.8-201ENST00000642140 221 ntBASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC83Q8IWF9 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 ELL2P1-201ENST00000413990 1906 ntBASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 AC006058.4-201ENST00000624016 1670 ntBASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 AP000347.1-202ENST00000435868 847 ntBASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 CEND1P1-201ENST00000451006 455 ntBASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 AC022145.2-201ENST00000598203 171 ntBASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC83Q8IWF9 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC83Q8IWF9 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC83Q8IWF9 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC83Q8IWF9 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC83Q8IWF9 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC83Q8IWF9 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC83Q8IWF9 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC83Q8IWF9 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms