Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC60Q8IWA6 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC60Q8IWA6 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC60Q8IWA6 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
CCDC60Q8IWA6 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC60Q8IWA6 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC60Q8IWA6 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC60Q8IWA6 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC60Q8IWA6 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC60Q8IWA6 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.55■□□□□ 0.4
CCDC60Q8IWA6 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC60Q8IWA6 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC60Q8IWA6 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC60Q8IWA6 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC60Q8IWA6 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC60Q8IWA6 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC60Q8IWA6 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC60Q8IWA6 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC60Q8IWA6 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC60Q8IWA6 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC60Q8IWA6 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC60Q8IWA6 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC60Q8IWA6 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 TTTY23B-201ENST00000442790 549 ntBASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 AL359711.2-201ENST00000563105 872 ntBASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC60Q8IWA6 AL391005.1-201ENST00000623953 2435 ntBASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 AL049840.4-201ENST00000602422 811 ntBASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC60Q8IWA6 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
CCDC60Q8IWA6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
CCDC60Q8IWA6 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.52■□□□□ 0.4
CCDC60Q8IWA6 INTS4P2-202ENST00000614726 2019 ntBASIC17.52■□□□□ 0.4
CCDC60Q8IWA6 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CCDC60Q8IWA6 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms