Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
APLFQ8IW19 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
APLFQ8IW19 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
APLFQ8IW19 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
APLFQ8IW19 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
APLFQ8IW19 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
APLFQ8IW19 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
APLFQ8IW19 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
APLFQ8IW19 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
APLFQ8IW19 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.84■□□□□ 0.13
APLFQ8IW19 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
APLFQ8IW19 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.84■□□□□ 0.13
APLFQ8IW19 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
APLFQ8IW19 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
APLFQ8IW19 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
APLFQ8IW19 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.84■□□□□ 0.13
APLFQ8IW19 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.84■□□□□ 0.13
APLFQ8IW19 AL671277.1-201ENST00000429656 993 ntBASIC15.84■□□□□ 0.13
APLFQ8IW19 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
APLFQ8IW19 TIMM8BP1-201ENST00000452384 211 ntBASIC15.84■□□□□ 0.13
APLFQ8IW19 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.84■□□□□ 0.13
APLFQ8IW19 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
APLFQ8IW19 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.84■□□□□ 0.13
APLFQ8IW19 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.84■□□□□ 0.13
APLFQ8IW19 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
APLFQ8IW19 AC005498.2-205ENST00000593218 784 ntBASIC15.84■□□□□ 0.13
APLFQ8IW19 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.84■□□□□ 0.13
APLFQ8IW19 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.84■□□□□ 0.13
APLFQ8IW19 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.84■□□□□ 0.13
APLFQ8IW19 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
APLFQ8IW19 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
APLFQ8IW19 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
APLFQ8IW19 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
APLFQ8IW19 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.84■□□□□ 0.13
APLFQ8IW19 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
APLFQ8IW19 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
APLFQ8IW19 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
APLFQ8IW19 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
APLFQ8IW19 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
APLFQ8IW19 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
APLFQ8IW19 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
APLFQ8IW19 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
APLFQ8IW19 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.84■□□□□ 0.13
APLFQ8IW19 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
APLFQ8IW19 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.84■□□□□ 0.13
APLFQ8IW19 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
APLFQ8IW19 AC139749.1-202ENST00000617529 3139 ntBASIC15.83■□□□□ 0.13
APLFQ8IW19 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.83■□□□□ 0.13
APLFQ8IW19 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
APLFQ8IW19 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
APLFQ8IW19 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.13
APLFQ8IW19 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
APLFQ8IW19 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.13
APLFQ8IW19 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
APLFQ8IW19 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.13
APLFQ8IW19 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.83■□□□□ 0.13
APLFQ8IW19 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
APLFQ8IW19 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
APLFQ8IW19 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
APLFQ8IW19 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
APLFQ8IW19 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
APLFQ8IW19 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APLFQ8IW19 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APLFQ8IW19 AC092474.2-201ENST00000424288 719 ntBASIC15.83■□□□□ 0.12
APLFQ8IW19 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
APLFQ8IW19 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.83■□□□□ 0.12
APLFQ8IW19 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.83■□□□□ 0.12
APLFQ8IW19 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.83■□□□□ 0.12
APLFQ8IW19 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.83■□□□□ 0.12
APLFQ8IW19 RNA5SP421-201ENST00000516864 134 ntBASIC15.83■□□□□ 0.12
APLFQ8IW19 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
APLFQ8IW19 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
APLFQ8IW19 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
APLFQ8IW19 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.83■□□□□ 0.12
APLFQ8IW19 AC093520.2-201ENST00000561830 333 ntBASIC15.83■□□□□ 0.12
APLFQ8IW19 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.83■□□□□ 0.12
APLFQ8IW19 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.83■□□□□ 0.12
APLFQ8IW19 AC099522.2-201ENST00000607001 744 ntBASIC15.83■□□□□ 0.12
APLFQ8IW19 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.12
APLFQ8IW19 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.83■□□□□ 0.12
APLFQ8IW19 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.83■□□□□ 0.12
APLFQ8IW19 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.83■□□□□ 0.12
APLFQ8IW19 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.83■□□□□ 0.12
APLFQ8IW19 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
APLFQ8IW19 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APLFQ8IW19 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APLFQ8IW19 AL109954.1-202ENST00000564051 2148 ntBASIC15.83■□□□□ 0.12
APLFQ8IW19 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
APLFQ8IW19 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APLFQ8IW19 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
APLFQ8IW19 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
APLFQ8IW19 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.83■□□□□ 0.12
APLFQ8IW19 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
APLFQ8IW19 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.82■□□□□ 0.12
APLFQ8IW19 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APLFQ8IW19 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
APLFQ8IW19 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APLFQ8IW19 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
APLFQ8IW19 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.82■□□□□ 0.12
APLFQ8IW19 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms