Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 CR382287.1-201ENST00000623954 586 ntBASIC17.11■□□□□ 0.33
HERC6Q8IVU3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HERC6Q8IVU3 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 GGT3P-204ENST00000453783 1664 ntBASIC17.1■□□□□ 0.33
HERC6Q8IVU3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 AC011270.2-201ENST00000624293 2550 ntBASIC17.1■□□□□ 0.33
HERC6Q8IVU3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 CALR4P-201ENST00000431943 946 ntBASIC17.1■□□□□ 0.33
HERC6Q8IVU3 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 AC023310.1-201ENST00000554836 735 ntBASIC17.1■□□□□ 0.33
HERC6Q8IVU3 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HERC6Q8IVU3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 IGHJ2P-201ENST00000454480 60 ntBASIC17.09■□□□□ 0.33
HERC6Q8IVU3 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 PARP8-206ENST00000503665 572 ntTSL 4 BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 GNRHR2-203ENST00000581100 1187 ntBASIC17.09■□□□□ 0.33
HERC6Q8IVU3 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 AC106872.11-201ENST00000605838 421 ntBASIC17.09■□□□□ 0.33
HERC6Q8IVU3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 AC046158.3-201ENST00000624947 2558 ntBASIC17.09■□□□□ 0.33
HERC6Q8IVU3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HERC6Q8IVU3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HERC6Q8IVU3 AC008894.3-201ENST00000624324 3103 ntBASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms