Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF135Q8IUD6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
RNF135Q8IUD6 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF135Q8IUD6 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.86■□□□□ 0.29
RNF135Q8IUD6 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.86■□□□□ 0.29
RNF135Q8IUD6 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF135Q8IUD6 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 PKD1P5-201ENST00000532415 10291 ntBASIC16.85■□□□□ 0.29
RNF135Q8IUD6 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 AC005229.1-201ENST00000392885 409 ntBASIC16.85■□□□□ 0.29
RNF135Q8IUD6 MIR1247-201ENST00000408206 136 ntBASIC16.85■□□□□ 0.29
RNF135Q8IUD6 SPDYE17-201ENST00000412399 783 ntBASIC16.85■□□□□ 0.29
RNF135Q8IUD6 GPAA1P2-201ENST00000417923 928 ntBASIC16.85■□□□□ 0.29
RNF135Q8IUD6 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
RNF135Q8IUD6 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 ALOX12P2-203ENST00000570921 1945 ntBASIC16.84■□□□□ 0.29
RNF135Q8IUD6 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 AC120057.1-201ENST00000483947 663 ntBASIC16.84■□□□□ 0.29
RNF135Q8IUD6 RNA5SP423-201ENST00000517127 109 ntBASIC16.84■□□□□ 0.29
RNF135Q8IUD6 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 AC092337.1-201ENST00000568699 1129 ntBASIC16.84■□□□□ 0.29
RNF135Q8IUD6 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF135Q8IUD6 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RNF135Q8IUD6 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.83■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms