Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.42□□□□□ -0.1
SHFQ7M4L6 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SHFQ7M4L6 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SHFQ7M4L6 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHFQ7M4L6 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHFQ7M4L6 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SHFQ7M4L6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.42□□□□□ -0.1
SHFQ7M4L6 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SHFQ7M4L6 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SHFQ7M4L6 FAM45BP-202ENST00000592932 1624 ntBASIC14.42□□□□□ -0.1
SHFQ7M4L6 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHFQ7M4L6 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SHFQ7M4L6 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.42□□□□□ -0.1
SHFQ7M4L6 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SHFQ7M4L6 AC245100.5-201ENST00000452108 331 ntBASIC14.42□□□□□ -0.1
SHFQ7M4L6 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SHFQ7M4L6 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.42□□□□□ -0.1
SHFQ7M4L6 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.42□□□□□ -0.1
SHFQ7M4L6 RN7SL510P-201ENST00000581311 263 ntBASIC14.42□□□□□ -0.1
SHFQ7M4L6 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHFQ7M4L6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SHFQ7M4L6 AL009183.1-201ENST00000603760 355 ntBASIC14.42□□□□□ -0.1
SHFQ7M4L6 AL691432.3-201ENST00000621860 400 ntBASIC14.42□□□□□ -0.1
SHFQ7M4L6 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.42□□□□□ -0.1
SHFQ7M4L6 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.42□□□□□ -0.1
SHFQ7M4L6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SHFQ7M4L6 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SHFQ7M4L6 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHFQ7M4L6 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.42□□□□□ -0.1
SHFQ7M4L6 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHFQ7M4L6 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHFQ7M4L6 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SHFQ7M4L6 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHFQ7M4L6 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SHFQ7M4L6 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SHFQ7M4L6 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.42□□□□□ -0.1
SHFQ7M4L6 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHFQ7M4L6 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHFQ7M4L6 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
SHFQ7M4L6 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SHFQ7M4L6 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHFQ7M4L6 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.41□□□□□ -0.1
SHFQ7M4L6 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHFQ7M4L6 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.41□□□□□ -0.1
SHFQ7M4L6 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHFQ7M4L6 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SHFQ7M4L6 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.41□□□□□ -0.1
SHFQ7M4L6 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHFQ7M4L6 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHFQ7M4L6 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHFQ7M4L6 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHFQ7M4L6 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHFQ7M4L6 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHFQ7M4L6 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHFQ7M4L6 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHFQ7M4L6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHFQ7M4L6 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHFQ7M4L6 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.41□□□□□ -0.1
SHFQ7M4L6 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.41□□□□□ -0.1
SHFQ7M4L6 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHFQ7M4L6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHFQ7M4L6 RHOQP3-201ENST00000437982 621 ntBASIC14.41□□□□□ -0.1
SHFQ7M4L6 AC009947.1-201ENST00000444350 727 ntBASIC14.41□□□□□ -0.1
SHFQ7M4L6 HCG4B-203ENST00000450128 991 ntBASIC14.41□□□□□ -0.1
SHFQ7M4L6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHFQ7M4L6 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.41□□□□□ -0.1
SHFQ7M4L6 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
SHFQ7M4L6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.41□□□□□ -0.1
SHFQ7M4L6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.41□□□□□ -0.1
SHFQ7M4L6 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.41□□□□□ -0.1
SHFQ7M4L6 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SHFQ7M4L6 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.41□□□□□ -0.1
SHFQ7M4L6 MIR7706-201ENST00000613747 67 ntBASIC14.41□□□□□ -0.1
SHFQ7M4L6 AL031008.1-201ENST00000619963 541 ntBASIC14.41□□□□□ -0.1
SHFQ7M4L6 AC116407.3-201ENST00000623905 1129 ntBASIC14.41□□□□□ -0.1
SHFQ7M4L6 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.41□□□□□ -0.1
SHFQ7M4L6 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
SHFQ7M4L6 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHFQ7M4L6 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SHFQ7M4L6 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
SHFQ7M4L6 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHFQ7M4L6 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SHFQ7M4L6 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHFQ7M4L6 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SHFQ7M4L6 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHFQ7M4L6 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SHFQ7M4L6 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.41□□□□□ -0.1
SHFQ7M4L6 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SHFQ7M4L6 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.41□□□□□ -0.1
SHFQ7M4L6 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.41□□□□□ -0.1
SHFQ7M4L6 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHFQ7M4L6 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
SHFQ7M4L6 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SHFQ7M4L6 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.41□□□□□ -0.1
SHFQ7M4L6 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHFQ7M4L6 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.41□□□□□ -0.1
SHFQ7M4L6 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.41□□□□□ -0.1
SHFQ7M4L6 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
SHFQ7M4L6 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHFQ7M4L6 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms