Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 AC018845.2-201ENST00000568326 409 ntBASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 AC064836.3-201ENST00000607928 673 ntBASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SMARCD3Q6STE5 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 AC068137.2-201ENST00000605408 478 ntBASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 HLA-A-201ENST00000376802 1334 ntBASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.55□□□□□ -0.08
SMARCD3Q6STE5 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 AC145285.3-201ENST00000564603 959 ntBASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.54□□□□□ -0.08
SMARCD3Q6STE5 AC104109.2-201ENST00000602919 1418 ntBASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms