Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC62Q6P9F0 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 AL607033.1-201ENST00000623900 1599 ntBASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 AC124283.3-201ENST00000570869 594 ntBASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 MIR6775-201ENST00000617557 69 ntBASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 CU634019.7-201ENST00000624153 1185 ntBASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 FP236241.2-201ENST00000624906 1185 ntBASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC62Q6P9F0 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 ANKRD19P-201ENST00000338192 862 ntBASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 SLC25A47P1-201ENST00000531577 414 ntBASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 MIR5189-201ENST00000577370 114 ntBASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC62Q6P9F0 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms