Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.77■□□□□ 0.28
VARS2Q5ST30 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VARS2Q5ST30 AC008147.4-201ENST00000617570 1204 ntBASIC16.77■□□□□ 0.28
VARS2Q5ST30 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.77■□□□□ 0.28
VARS2Q5ST30 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
VARS2Q5ST30 CU634019.7-201ENST00000624153 1185 ntBASIC16.77■□□□□ 0.28
VARS2Q5ST30 FP236241.2-201ENST00000624906 1185 ntBASIC16.77■□□□□ 0.28
VARS2Q5ST30 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
VARS2Q5ST30 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC16.77■□□□□ 0.28
VARS2Q5ST30 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.77■□□□□ 0.28
VARS2Q5ST30 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VARS2Q5ST30 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
VARS2Q5ST30 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VARS2Q5ST30 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VARS2Q5ST30 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.77■□□□□ 0.27
VARS2Q5ST30 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
VARS2Q5ST30 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
VARS2Q5ST30 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VARS2Q5ST30 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.77■□□□□ 0.27
VARS2Q5ST30 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
VARS2Q5ST30 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VARS2Q5ST30 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.76■□□□□ 0.27
VARS2Q5ST30 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.76■□□□□ 0.27
VARS2Q5ST30 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
VARS2Q5ST30 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
VARS2Q5ST30 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VARS2Q5ST30 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VARS2Q5ST30 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
VARS2Q5ST30 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VARS2Q5ST30 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
VARS2Q5ST30 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VARS2Q5ST30 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VARS2Q5ST30 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.76■□□□□ 0.27
VARS2Q5ST30 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VARS2Q5ST30 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.76■□□□□ 0.27
VARS2Q5ST30 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
VARS2Q5ST30 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.76■□□□□ 0.27
VARS2Q5ST30 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC16.76■□□□□ 0.27
VARS2Q5ST30 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.76■□□□□ 0.27
VARS2Q5ST30 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.76■□□□□ 0.27
VARS2Q5ST30 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.76■□□□□ 0.27
VARS2Q5ST30 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.76■□□□□ 0.27
VARS2Q5ST30 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.76■□□□□ 0.27
VARS2Q5ST30 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC16.76■□□□□ 0.27
VARS2Q5ST30 AC105148.1-201ENST00000604961 409 ntBASIC16.76■□□□□ 0.27
VARS2Q5ST30 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.76■□□□□ 0.27
VARS2Q5ST30 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.76■□□□□ 0.27
VARS2Q5ST30 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
VARS2Q5ST30 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VARS2Q5ST30 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
VARS2Q5ST30 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
VARS2Q5ST30 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VARS2Q5ST30 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VARS2Q5ST30 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.76■□□□□ 0.27
VARS2Q5ST30 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
VARS2Q5ST30 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.76■□□□□ 0.27
VARS2Q5ST30 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.76■□□□□ 0.27
VARS2Q5ST30 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VARS2Q5ST30 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VARS2Q5ST30 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VARS2Q5ST30 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.75■□□□□ 0.27
VARS2Q5ST30 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VARS2Q5ST30 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
VARS2Q5ST30 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VARS2Q5ST30 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VARS2Q5ST30 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
VARS2Q5ST30 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VARS2Q5ST30 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
VARS2Q5ST30 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VARS2Q5ST30 AC010740.1-201ENST00000417035 684 ntBASIC16.75■□□□□ 0.27
VARS2Q5ST30 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC16.75■□□□□ 0.27
VARS2Q5ST30 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.75■□□□□ 0.27
VARS2Q5ST30 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC16.75■□□□□ 0.27
VARS2Q5ST30 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VARS2Q5ST30 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VARS2Q5ST30 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.75■□□□□ 0.27
VARS2Q5ST30 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.75■□□□□ 0.27
VARS2Q5ST30 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.75■□□□□ 0.27
VARS2Q5ST30 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.75■□□□□ 0.27
VARS2Q5ST30 AL049840.4-201ENST00000602422 811 ntBASIC16.75■□□□□ 0.27
VARS2Q5ST30 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.75■□□□□ 0.27
VARS2Q5ST30 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VARS2Q5ST30 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC16.75■□□□□ 0.27
VARS2Q5ST30 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VARS2Q5ST30 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VARS2Q5ST30 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
VARS2Q5ST30 INTS4P2-202ENST00000614726 2019 ntBASIC16.75■□□□□ 0.27
VARS2Q5ST30 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.75■□□□□ 0.27
VARS2Q5ST30 PCDH8P1-201ENST00000428983 2773 ntBASIC16.75■□□□□ 0.27
VARS2Q5ST30 AL121723.1-201ENST00000445194 1519 ntBASIC16.75■□□□□ 0.27
VARS2Q5ST30 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VARS2Q5ST30 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VARS2Q5ST30 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.74■□□□□ 0.27
VARS2Q5ST30 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
VARS2Q5ST30 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VARS2Q5ST30 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
VARS2Q5ST30 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.74■□□□□ 0.27
VARS2Q5ST30 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
VARS2Q5ST30 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VARS2Q5ST30 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms