Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN20Q4JDL3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 Z97205.2-201ENST00000564697 1639 ntBASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 RFPL4AP1-201ENST00000530883 850 ntBASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 AL590560.3-201ENST00000623350 461 ntBASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 AC013268.4-201ENST00000637413 2228 ntBASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 AC087499.5-201ENST00000452760 1342 ntBASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PTPN20Q4JDL3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 IGHV3-42-201ENST00000520410 361 ntBASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 AL390754.1-201ENST00000619088 582 ntBASIC16.66■□□□□ 0.26
PTPN20Q4JDL3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms