Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.17■□□□□ 0.5
USH1GQ495M9 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USH1GQ495M9 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USH1GQ495M9 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
USH1GQ495M9 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
USH1GQ495M9 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USH1GQ495M9 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
USH1GQ495M9 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
USH1GQ495M9 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
USH1GQ495M9 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.17■□□□□ 0.5
USH1GQ495M9 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
USH1GQ495M9 AC010491.1-201ENST00000563101 2797 ntBASIC18.17■□□□□ 0.5
USH1GQ495M9 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USH1GQ495M9 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.17■□□□□ 0.5
USH1GQ495M9 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USH1GQ495M9 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USH1GQ495M9 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
USH1GQ495M9 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.17■□□□□ 0.5
USH1GQ495M9 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
USH1GQ495M9 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.17■□□□□ 0.5
USH1GQ495M9 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.17■□□□□ 0.5
USH1GQ495M9 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USH1GQ495M9 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.17■□□□□ 0.5
USH1GQ495M9 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.17■□□□□ 0.5
USH1GQ495M9 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.17■□□□□ 0.5
USH1GQ495M9 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.17■□□□□ 0.5
USH1GQ495M9 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.17■□□□□ 0.5
USH1GQ495M9 WFDC1-204ENST00000613603 549 ntBASIC18.17■□□□□ 0.5
USH1GQ495M9 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
USH1GQ495M9 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USH1GQ495M9 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USH1GQ495M9 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USH1GQ495M9 AC024909.3-201ENST00000611513 2257 ntBASIC18.17■□□□□ 0.5
USH1GQ495M9 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.17■□□□□ 0.5
USH1GQ495M9 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USH1GQ495M9 CYP2T1P-202ENST00000641596 2535 ntBASIC18.17■□□□□ 0.5
USH1GQ495M9 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
USH1GQ495M9 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.17■□□□□ 0.5
USH1GQ495M9 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.17■□□□□ 0.5
USH1GQ495M9 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.17■□□□□ 0.5
USH1GQ495M9 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USH1GQ495M9 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USH1GQ495M9 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.17■□□□□ 0.5
USH1GQ495M9 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USH1GQ495M9 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.17■□□□□ 0.5
USH1GQ495M9 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.17■□□□□ 0.5
USH1GQ495M9 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.17■□□□□ 0.5
USH1GQ495M9 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USH1GQ495M9 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.16■□□□□ 0.5
USH1GQ495M9 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
USH1GQ495M9 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
USH1GQ495M9 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
USH1GQ495M9 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
USH1GQ495M9 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.16■□□□□ 0.5
USH1GQ495M9 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
USH1GQ495M9 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USH1GQ495M9 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
USH1GQ495M9 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
USH1GQ495M9 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.16■□□□□ 0.5
USH1GQ495M9 AL512384.1-201ENST00000406683 331 ntBASIC18.16■□□□□ 0.5
USH1GQ495M9 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.16■□□□□ 0.5
USH1GQ495M9 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.16■□□□□ 0.5
USH1GQ495M9 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.16■□□□□ 0.5
USH1GQ495M9 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.16■□□□□ 0.5
USH1GQ495M9 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.16■□□□□ 0.5
USH1GQ495M9 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.16■□□□□ 0.5
USH1GQ495M9 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.16■□□□□ 0.5
USH1GQ495M9 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.16■□□□□ 0.5
USH1GQ495M9 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.16■□□□□ 0.5
USH1GQ495M9 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.16■□□□□ 0.5
USH1GQ495M9 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.16■□□□□ 0.5
USH1GQ495M9 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
USH1GQ495M9 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
USH1GQ495M9 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.16■□□□□ 0.5
USH1GQ495M9 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.16■□□□□ 0.5
USH1GQ495M9 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USH1GQ495M9 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USH1GQ495M9 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USH1GQ495M9 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
USH1GQ495M9 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
USH1GQ495M9 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.16■□□□□ 0.5
USH1GQ495M9 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USH1GQ495M9 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.16■□□□□ 0.5
USH1GQ495M9 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.16■□□□□ 0.5
USH1GQ495M9 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USH1GQ495M9 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.16■□□□□ 0.5
USH1GQ495M9 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USH1GQ495M9 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USH1GQ495M9 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
USH1GQ495M9 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USH1GQ495M9 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
USH1GQ495M9 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
USH1GQ495M9 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
USH1GQ495M9 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
USH1GQ495M9 AC011270.2-201ENST00000624293 2550 ntBASIC18.15■□□□□ 0.5
USH1GQ495M9 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.15■□□□□ 0.5
USH1GQ495M9 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USH1GQ495M9 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
USH1GQ495M9 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
USH1GQ495M9 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms