Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ODF4Q2M2E3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ODF4Q2M2E3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.14□□□□□ -0.15
ODF4Q2M2E3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ODF4Q2M2E3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ODF4Q2M2E3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.14□□□□□ -0.15
ODF4Q2M2E3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.14□□□□□ -0.15
ODF4Q2M2E3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ODF4Q2M2E3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ODF4Q2M2E3 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ODF4Q2M2E3 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ODF4Q2M2E3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.14□□□□□ -0.15
ODF4Q2M2E3 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 MRPL3P1-201ENST00000400109 1033 ntBASIC14.13□□□□□ -0.15
ODF4Q2M2E3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 AC093909.1-201ENST00000504731 1122 ntBASIC14.13□□□□□ -0.15
ODF4Q2M2E3 AC018845.2-201ENST00000568326 409 ntBASIC14.13□□□□□ -0.15
ODF4Q2M2E3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 AC023141.13-201ENST00000604991 943 ntBASIC14.13□□□□□ -0.15
ODF4Q2M2E3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
ODF4Q2M2E3 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 AC096734.2-201ENST00000562054 433 ntBASIC14.12□□□□□ -0.15
ODF4Q2M2E3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 AC007064.4-201ENST00000637740 555 ntBASIC14.12□□□□□ -0.15
ODF4Q2M2E3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ODF4Q2M2E3 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms