Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP1S1P61966 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
AP1S1P61966 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.95■□□□□ 0.14
AP1S1P61966 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.95■□□□□ 0.14
AP1S1P61966 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.95■□□□□ 0.14
AP1S1P61966 RN7SL204P-201ENST00000582831 262 ntBASIC15.95■□□□□ 0.14
AP1S1P61966 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
AP1S1P61966 LINC02560-201ENST00000596379 459 ntBASIC15.95■□□□□ 0.14
AP1S1P61966 AC008761.3-201ENST00000624803 892 ntBASIC15.95■□□□□ 0.14
AP1S1P61966 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
AP1S1P61966 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
AP1S1P61966 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP1S1P61966 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.95■□□□□ 0.14
AP1S1P61966 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.95■□□□□ 0.14
AP1S1P61966 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.95■□□□□ 0.14
AP1S1P61966 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
AP1S1P61966 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP1S1P61966 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
AP1S1P61966 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP1S1P61966 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
AP1S1P61966 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP1S1P61966 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP1S1P61966 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
AP1S1P61966 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP1S1P61966 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.94■□□□□ 0.14
AP1S1P61966 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP1S1P61966 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
AP1S1P61966 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.94■□□□□ 0.14
AP1S1P61966 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP1S1P61966 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.94■□□□□ 0.14
AP1S1P61966 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP1S1P61966 AC236430.1-201ENST00000402231 743 ntBASIC15.94■□□□□ 0.14
AP1S1P61966 TOMM22P5-201ENST00000416399 439 ntBASIC15.94■□□□□ 0.14
AP1S1P61966 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.94■□□□□ 0.14
AP1S1P61966 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.94■□□□□ 0.14
AP1S1P61966 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.94■□□□□ 0.14
AP1S1P61966 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.94■□□□□ 0.14
AP1S1P61966 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.94■□□□□ 0.14
AP1S1P61966 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
AP1S1P61966 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.94■□□□□ 0.14
AP1S1P61966 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.94■□□□□ 0.14
AP1S1P61966 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.94■□□□□ 0.14
AP1S1P61966 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.94■□□□□ 0.14
AP1S1P61966 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP1S1P61966 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP1S1P61966 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP1S1P61966 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP1S1P61966 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.94■□□□□ 0.14
AP1S1P61966 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP1S1P61966 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP1S1P61966 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
AP1S1P61966 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP1S1P61966 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP1S1P61966 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP1S1P61966 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
AP1S1P61966 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP1S1P61966 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP1S1P61966 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP1S1P61966 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.94■□□□□ 0.14
AP1S1P61966 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP1S1P61966 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
AP1S1P61966 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP1S1P61966 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
AP1S1P61966 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
AP1S1P61966 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.93■□□□□ 0.14
AP1S1P61966 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
AP1S1P61966 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.93■□□□□ 0.14
AP1S1P61966 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
AP1S1P61966 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP1S1P61966 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP1S1P61966 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP1S1P61966 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
AP1S1P61966 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP1S1P61966 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP1S1P61966 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.93■□□□□ 0.14
AP1S1P61966 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP1S1P61966 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP1S1P61966 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP1S1P61966 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP1S1P61966 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP1S1P61966 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
AP1S1P61966 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP1S1P61966 MEP1AP4-201ENST00000423244 1087 ntBASIC15.93■□□□□ 0.14
AP1S1P61966 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.93■□□□□ 0.14
AP1S1P61966 MEIS3P1-201ENST00000495167 958 ntBASIC15.93■□□□□ 0.14
AP1S1P61966 TERF1P3-201ENST00000505638 1227 ntBASIC15.93■□□□□ 0.14
AP1S1P61966 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.93■□□□□ 0.14
AP1S1P61966 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.93■□□□□ 0.14
AP1S1P61966 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.93■□□□□ 0.14
AP1S1P61966 AF228730.6-201ENST00000641497 218 ntBASIC15.93■□□□□ 0.14
AP1S1P61966 AC084121.3-201ENST00000641716 218 ntBASIC15.93■□□□□ 0.14
AP1S1P61966 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
AP1S1P61966 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP1S1P61966 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.93■□□□□ 0.14
AP1S1P61966 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
AP1S1P61966 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.93■□□□□ 0.14
AP1S1P61966 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
AP1S1P61966 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
AP1S1P61966 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
AP1S1P61966 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms