Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CDC42P60953 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC42P60953 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.59□□□□□ -0.07
CDC42P60953 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC42P60953 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC42P60953 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.59□□□□□ -0.07
CDC42P60953 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDC42P60953 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.59□□□□□ -0.07
CDC42P60953 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
CDC42P60953 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.59□□□□□ -0.07
CDC42P60953 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC42P60953 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDC42P60953 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC42P60953 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.58□□□□□ -0.07
CDC42P60953 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.58□□□□□ -0.07
CDC42P60953 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDC42P60953 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
CDC42P60953 AC232323.1-201ENST00000540724 2099 ntBASIC14.58□□□□□ -0.08
CDC42P60953 REXO1L5P-201ENST00000622260 2098 ntBASIC14.58□□□□□ -0.08
CDC42P60953 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CDC42P60953 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDC42P60953 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.58□□□□□ -0.08
CDC42P60953 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC42P60953 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC42P60953 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.58□□□□□ -0.08
CDC42P60953 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDC42P60953 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CDC42P60953 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.58□□□□□ -0.08
CDC42P60953 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.58□□□□□ -0.08
CDC42P60953 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.58□□□□□ -0.08
CDC42P60953 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.58□□□□□ -0.08
CDC42P60953 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
CDC42P60953 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.58□□□□□ -0.08
CDC42P60953 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.58□□□□□ -0.08
CDC42P60953 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.58□□□□□ -0.08
CDC42P60953 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.58□□□□□ -0.08
CDC42P60953 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.58□□□□□ -0.08
CDC42P60953 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC42P60953 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDC42P60953 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.58□□□□□ -0.08
CDC42P60953 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.58□□□□□ -0.08
CDC42P60953 AL445228.2-201ENST00000605589 952 ntBASIC14.58□□□□□ -0.08
CDC42P60953 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.58□□□□□ -0.08
CDC42P60953 MIR1199-201ENST00000621445 119 ntBASIC14.58□□□□□ -0.08
CDC42P60953 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC42P60953 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC42P60953 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC42P60953 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC42P60953 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.58□□□□□ -0.08
CDC42P60953 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CDC42P60953 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.58□□□□□ -0.08
CDC42P60953 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.58□□□□□ -0.08
CDC42P60953 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC42P60953 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC42P60953 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.58□□□□□ -0.08
CDC42P60953 KRT8P44-201ENST00000441609 1350 ntBASIC14.58□□□□□ -0.08
CDC42P60953 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDC42P60953 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.58□□□□□ -0.08
CDC42P60953 AL390755.1-201ENST00000623716 2027 ntBASIC14.58□□□□□ -0.08
CDC42P60953 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
CDC42P60953 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42P60953 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.57□□□□□ -0.08
CDC42P60953 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.57□□□□□ -0.08
CDC42P60953 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42P60953 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42P60953 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42P60953 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42P60953 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42P60953 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CDC42P60953 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CDC42P60953 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CDC42P60953 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
CDC42P60953 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42P60953 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42P60953 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CDC42P60953 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42P60953 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42P60953 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CDC42P60953 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42P60953 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42P60953 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42P60953 AC073621.1-201ENST00000392730 636 ntBASIC14.57□□□□□ -0.08
CDC42P60953 MIR1224-201ENST00000408193 85 ntBASIC14.57□□□□□ -0.08
CDC42P60953 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42P60953 FAM185BP-201ENST00000443595 716 ntBASIC14.57□□□□□ -0.08
CDC42P60953 KRT18P34-201ENST00000488218 1270 ntBASIC14.57□□□□□ -0.08
CDC42P60953 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.57□□□□□ -0.08
CDC42P60953 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.57□□□□□ -0.08
CDC42P60953 AC021087.4-201ENST00000563761 564 ntBASIC14.57□□□□□ -0.08
CDC42P60953 AL031432.2-201ENST00000566714 459 ntBASIC14.57□□□□□ -0.08
CDC42P60953 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.57□□□□□ -0.08
CDC42P60953 AL928711.1-201ENST00000570165 459 ntBASIC14.57□□□□□ -0.08
CDC42P60953 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.57□□□□□ -0.08
CDC42P60953 AL645728.2-201ENST00000641974 660 ntBASIC14.57□□□□□ -0.08
CDC42P60953 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42P60953 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42P60953 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42P60953 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42P60953 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42P60953 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms