Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH12P55289 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH12P55289 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH12P55289 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH12P55289 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH12P55289 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CDH12P55289 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH12P55289 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH12P55289 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH12P55289 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH12P55289 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH12P55289 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH12P55289 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH12P55289 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH12P55289 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH12P55289 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH12P55289 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH12P55289 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CDH12P55289 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH12P55289 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CDH12P55289 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CDH12P55289 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH12P55289 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH12P55289 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH12P55289 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH12P55289 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH12P55289 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH12P55289 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH12P55289 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CDH12P55289 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH12P55289 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH12P55289 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH12P55289 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH12P55289 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.85□□□□□ -0.03
CDH12P55289 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.85□□□□□ -0.03
CDH12P55289 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH12P55289 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH12P55289 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH12P55289 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH12P55289 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDH12P55289 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.85□□□□□ -0.03
CDH12P55289 WASH6P-202ENST00000359512 1437 ntBASIC14.85□□□□□ -0.03
CDH12P55289 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH12P55289 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH12P55289 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.85□□□□□ -0.03
CDH12P55289 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH12P55289 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.85□□□□□ -0.03
CDH12P55289 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.85□□□□□ -0.03
CDH12P55289 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.85□□□□□ -0.03
CDH12P55289 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH12P55289 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CDH12P55289 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CDH12P55289 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH12P55289 AP001282.1-201ENST00000531301 1499 ntBASIC14.85□□□□□ -0.03
CDH12P55289 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH12P55289 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH12P55289 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.85□□□□□ -0.03
CDH12P55289 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CDH12P55289 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.85□□□□□ -0.03
CDH12P55289 AL590627.1-203ENST00000421194 1026 ntBASIC14.85□□□□□ -0.03
CDH12P55289 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.85□□□□□ -0.03
CDH12P55289 FDX1P1-201ENST00000449115 551 ntBASIC14.85□□□□□ -0.03
CDH12P55289 AC074386.1-202ENST00000463561 864 ntBASIC14.85□□□□□ -0.03
CDH12P55289 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.85□□□□□ -0.03
CDH12P55289 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.85□□□□□ -0.03
CDH12P55289 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.85□□□□□ -0.03
CDH12P55289 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.85□□□□□ -0.03
CDH12P55289 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.85□□□□□ -0.03
CDH12P55289 PDPK2P-202ENST00000562415 1191 ntBASIC14.85□□□□□ -0.03
CDH12P55289 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.85□□□□□ -0.03
CDH12P55289 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.85□□□□□ -0.03
CDH12P55289 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CDH12P55289 AC068137.2-201ENST00000605408 478 ntBASIC14.85□□□□□ -0.03
CDH12P55289 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDH12P55289 AL513190.1-201ENST00000621254 727 ntBASIC14.85□□□□□ -0.03
CDH12P55289 AL161645.1-201ENST00000622716 1255 ntBASIC14.85□□□□□ -0.03
CDH12P55289 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH12P55289 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDH12P55289 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDH12P55289 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.85□□□□□ -0.03
CDH12P55289 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.85□□□□□ -0.03
CDH12P55289 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH12P55289 AL589702.1-201ENST00000641229 1509 ntBASIC14.85□□□□□ -0.03
CDH12P55289 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDH12P55289 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH12P55289 TCAF2P1-201ENST00000291129 2421 ntBASIC14.85□□□□□ -0.03
CDH12P55289 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH12P55289 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH12P55289 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CDH12P55289 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CDH12P55289 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH12P55289 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CDH12P55289 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH12P55289 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH12P55289 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.85□□□□□ -0.03
CDH12P55289 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH12P55289 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH12P55289 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH12P55289 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDH12P55289 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms