Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
EPHA4P54764 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.03
EPHA4P54764 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.27■□□□□ 0.03
EPHA4P54764 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
EPHA4P54764 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
EPHA4P54764 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
EPHA4P54764 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.27■□□□□ 0.03
EPHA4P54764 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA4P54764 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
EPHA4P54764 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA4P54764 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA4P54764 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.26■□□□□ 0.03
EPHA4P54764 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA4P54764 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA4P54764 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA4P54764 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA4P54764 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA4P54764 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA4P54764 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA4P54764 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA4P54764 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
EPHA4P54764 RPL13AP25-201ENST00000484130 612 ntBASIC15.26■□□□□ 0.03
EPHA4P54764 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.26■□□□□ 0.03
EPHA4P54764 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.26■□□□□ 0.03
EPHA4P54764 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.26■□□□□ 0.03
EPHA4P54764 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC15.26■□□□□ 0.03
EPHA4P54764 AC132938.2-201ENST00000579188 680 ntBASIC15.26■□□□□ 0.03
EPHA4P54764 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.26■□□□□ 0.03
EPHA4P54764 AC097359.3-201ENST00000603982 1210 ntBASIC15.26■□□□□ 0.03
EPHA4P54764 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.26■□□□□ 0.03
EPHA4P54764 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.26■□□□□ 0.03
EPHA4P54764 AL591163.1-201ENST00000641757 987 ntBASIC15.26■□□□□ 0.03
EPHA4P54764 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
EPHA4P54764 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
EPHA4P54764 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.26■□□□□ 0.03
EPHA4P54764 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA4P54764 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA4P54764 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA4P54764 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
EPHA4P54764 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA4P54764 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
EPHA4P54764 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
EPHA4P54764 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.25■□□□□ 0.03
EPHA4P54764 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA4P54764 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA4P54764 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA4P54764 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA4P54764 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA4P54764 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA4P54764 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA4P54764 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
EPHA4P54764 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA4P54764 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
EPHA4P54764 TTTY23B-201ENST00000442790 549 ntBASIC15.25■□□□□ 0.03
EPHA4P54764 AC007389.4-201ENST00000454674 793 ntBASIC15.25■□□□□ 0.03
EPHA4P54764 FAM86LP-201ENST00000478302 853 ntBASIC15.25■□□□□ 0.03
EPHA4P54764 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.25■□□□□ 0.03
EPHA4P54764 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA4P54764 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.25■□□□□ 0.03
EPHA4P54764 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.25■□□□□ 0.03
EPHA4P54764 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
EPHA4P54764 AL162274.1-201ENST00000617191 1098 ntBASIC15.25■□□□□ 0.03
EPHA4P54764 AL033527.5-201ENST00000641382 801 ntBASIC15.25■□□□□ 0.03
EPHA4P54764 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.25■□□□□ 0.03
EPHA4P54764 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
EPHA4P54764 CDC14C-201ENST00000428251 1719 ntBASIC15.25■□□□□ 0.03
EPHA4P54764 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA4P54764 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA4P54764 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA4P54764 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.25■□□□□ 0.03
EPHA4P54764 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.25■□□□□ 0.03
EPHA4P54764 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.25■□□□□ 0.03
EPHA4P54764 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.25■□□□□ 0.03
EPHA4P54764 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
EPHA4P54764 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA4P54764 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.24■□□□□ 0.03
EPHA4P54764 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
EPHA4P54764 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.24■□□□□ 0.03
EPHA4P54764 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA4P54764 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.24■□□□□ 0.03
EPHA4P54764 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
EPHA4P54764 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA4P54764 AC026691.1-201ENST00000602502 2017 ntBASIC15.24■□□□□ 0.03
EPHA4P54764 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA4P54764 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
EPHA4P54764 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA4P54764 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA4P54764 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA4P54764 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
EPHA4P54764 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA4P54764 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
EPHA4P54764 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA4P54764 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA4P54764 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA4P54764 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
EPHA4P54764 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.24■□□□□ 0.03
EPHA4P54764 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
EPHA4P54764 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
EPHA4P54764 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.24■□□□□ 0.03
EPHA4P54764 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms