Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK1P53667 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK1P53667 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.64■□□□□ 0.09
LIMK1P53667 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
LIMK1P53667 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK1P53667 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
LIMK1P53667 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK1P53667 BAATP1-201ENST00000412284 1225 ntBASIC15.64■□□□□ 0.09
LIMK1P53667 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.64■□□□□ 0.09
LIMK1P53667 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC15.64■□□□□ 0.09
LIMK1P53667 AKR7A2P1-201ENST00000460134 915 ntBASIC15.64■□□□□ 0.09
LIMK1P53667 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.64■□□□□ 0.09
LIMK1P53667 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.64■□□□□ 0.09
LIMK1P53667 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.64■□□□□ 0.09
LIMK1P53667 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK1P53667 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.64■□□□□ 0.09
LIMK1P53667 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LIMK1P53667 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.64■□□□□ 0.09
LIMK1P53667 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LIMK1P53667 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.64■□□□□ 0.09
LIMK1P53667 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK1P53667 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK1P53667 AL671710.1-201ENST00000610245 2349 ntBASIC15.64■□□□□ 0.09
LIMK1P53667 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK1P53667 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK1P53667 AC092053.1-201ENST00000605787 1936 ntBASIC15.64■□□□□ 0.09
LIMK1P53667 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.64■□□□□ 0.09
LIMK1P53667 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK1P53667 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.64■□□□□ 0.09
LIMK1P53667 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.64■□□□□ 0.09
LIMK1P53667 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK1P53667 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK1P53667 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK1P53667 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LIMK1P53667 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK1P53667 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.63■□□□□ 0.09
LIMK1P53667 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.63■□□□□ 0.09
LIMK1P53667 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK1P53667 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.63■□□□□ 0.09
LIMK1P53667 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK1P53667 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
LIMK1P53667 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK1P53667 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
LIMK1P53667 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
LIMK1P53667 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.63■□□□□ 0.09
LIMK1P53667 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK1P53667 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK1P53667 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK1P53667 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.63■□□□□ 0.09
LIMK1P53667 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.63■□□□□ 0.09
LIMK1P53667 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.63■□□□□ 0.09
LIMK1P53667 FAM86LP-201ENST00000478302 853 ntBASIC15.63■□□□□ 0.09
LIMK1P53667 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.63■□□□□ 0.09
LIMK1P53667 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.63■□□□□ 0.09
LIMK1P53667 KRT90P-201ENST00000549264 1064 ntBASIC15.63■□□□□ 0.09
LIMK1P53667 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.63■□□□□ 0.09
LIMK1P53667 AC124283.3-201ENST00000570869 594 ntBASIC15.63■□□□□ 0.09
LIMK1P53667 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC15.63■□□□□ 0.09
LIMK1P53667 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.63■□□□□ 0.09
LIMK1P53667 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.63■□□□□ 0.09
LIMK1P53667 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
LIMK1P53667 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK1P53667 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
LIMK1P53667 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.63■□□□□ 0.09
LIMK1P53667 AC138028.6-201ENST00000616106 1482 ntBASIC15.63■□□□□ 0.09
LIMK1P53667 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK1P53667 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.63■□□□□ 0.09
LIMK1P53667 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK1P53667 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK1P53667 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
LIMK1P53667 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK1P53667 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.63■□□□□ 0.09
LIMK1P53667 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK1P53667 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK1P53667 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.63■□□□□ 0.09
LIMK1P53667 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK1P53667 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK1P53667 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK1P53667 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK1P53667 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.63■□□□□ 0.09
LIMK1P53667 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.63■□□□□ 0.09
LIMK1P53667 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LIMK1P53667 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK1P53667 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK1P53667 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.62■□□□□ 0.09
LIMK1P53667 AL607033.1-201ENST00000623900 1599 ntBASIC15.62■□□□□ 0.09
LIMK1P53667 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK1P53667 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK1P53667 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
LIMK1P53667 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK1P53667 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK1P53667 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
LIMK1P53667 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.62■□□□□ 0.09
LIMK1P53667 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK1P53667 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK1P53667 MIR326-201ENST00000362220 95 ntBASIC15.62■□□□□ 0.09
LIMK1P53667 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.62■□□□□ 0.09
LIMK1P53667 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
LIMK1P53667 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK1P53667 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms