Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EFNA3P52797 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
EFNA3P52797 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EFNA3P52797 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
EFNA3P52797 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
EFNA3P52797 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
EFNA3P52797 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
EFNA3P52797 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
EFNA3P52797 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.84□□□□□ -0.03
EFNA3P52797 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EFNA3P52797 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
EFNA3P52797 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.84□□□□□ -0.03
EFNA3P52797 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.84□□□□□ -0.03
EFNA3P52797 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EFNA3P52797 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.84□□□□□ -0.03
EFNA3P52797 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.84□□□□□ -0.03
EFNA3P52797 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EFNA3P52797 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
EFNA3P52797 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
EFNA3P52797 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
EFNA3P52797 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
EFNA3P52797 FLJ16779-201ENST00000612722 7638 ntBASIC14.83□□□□□ -0.03
EFNA3P52797 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
EFNA3P52797 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
EFNA3P52797 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
EFNA3P52797 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
EFNA3P52797 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
EFNA3P52797 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
EFNA3P52797 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EFNA3P52797 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
EFNA3P52797 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
EFNA3P52797 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EFNA3P52797 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EFNA3P52797 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
EFNA3P52797 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.83□□□□□ -0.04
EFNA3P52797 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
EFNA3P52797 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EFNA3P52797 COX5BP8-201ENST00000416911 349 ntBASIC14.83□□□□□ -0.04
EFNA3P52797 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.83□□□□□ -0.04
EFNA3P52797 RN7SL692P-201ENST00000464677 288 ntBASIC14.83□□□□□ -0.04
EFNA3P52797 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.83□□□□□ -0.04
EFNA3P52797 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
EFNA3P52797 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.83□□□□□ -0.04
EFNA3P52797 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.83□□□□□ -0.04
EFNA3P52797 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.83□□□□□ -0.04
EFNA3P52797 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.83□□□□□ -0.04
EFNA3P52797 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
EFNA3P52797 CTBP2P3-201ENST00000585629 1255 ntBASIC14.83□□□□□ -0.04
EFNA3P52797 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.83□□□□□ -0.04
EFNA3P52797 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.83□□□□□ -0.04
EFNA3P52797 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.83□□□□□ -0.04
EFNA3P52797 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
EFNA3P52797 AC007431.3-201ENST00000623221 587 ntBASIC14.83□□□□□ -0.04
EFNA3P52797 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
EFNA3P52797 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.83□□□□□ -0.04
EFNA3P52797 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
EFNA3P52797 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EFNA3P52797 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EFNA3P52797 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
EFNA3P52797 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
EFNA3P52797 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
EFNA3P52797 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EFNA3P52797 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EFNA3P52797 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EFNA3P52797 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.83□□□□□ -0.04
EFNA3P52797 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
EFNA3P52797 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
EFNA3P52797 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.83□□□□□ -0.04
EFNA3P52797 CLK3P2-201ENST00000427566 1453 ntBASIC14.82□□□□□ -0.04
EFNA3P52797 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
EFNA3P52797 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EFNA3P52797 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
EFNA3P52797 PCDHA1-201ENST00000378133 2726 ntBASIC14.82□□□□□ -0.04
EFNA3P52797 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.82□□□□□ -0.04
EFNA3P52797 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.82□□□□□ -0.04
EFNA3P52797 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EFNA3P52797 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
EFNA3P52797 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
EFNA3P52797 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
EFNA3P52797 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.82□□□□□ -0.04
EFNA3P52797 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.82□□□□□ -0.04
EFNA3P52797 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.82□□□□□ -0.04
EFNA3P52797 ELK1P1-201ENST00000485699 580 ntBASIC14.82□□□□□ -0.04
EFNA3P52797 MEIS3P1-201ENST00000495167 958 ntBASIC14.82□□□□□ -0.04
EFNA3P52797 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.82□□□□□ -0.04
EFNA3P52797 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.82□□□□□ -0.04
EFNA3P52797 AC055876.2-201ENST00000531834 546 ntBASIC14.82□□□□□ -0.04
EFNA3P52797 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.82□□□□□ -0.04
EFNA3P52797 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
EFNA3P52797 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.82□□□□□ -0.04
EFNA3P52797 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
EFNA3P52797 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
EFNA3P52797 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
EFNA3P52797 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.82□□□□□ -0.04
EFNA3P52797 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.82□□□□□ -0.04
EFNA3P52797 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.82□□□□□ -0.04
EFNA3P52797 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.82□□□□□ -0.04
EFNA3P52797 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
EFNA3P52797 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
EFNA3P52797 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms