Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 SLC25A39P2-201ENST00000537614 270 ntBASIC15.25■□□□□ 0.03
HLCSP50747 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.25■□□□□ 0.03
HLCSP50747 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLCSP50747 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLCSP50747 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.25■□□□□ 0.03
HLCSP50747 AL136317.3-201ENST00000618497 906 ntBASIC15.25■□□□□ 0.03
HLCSP50747 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.25■□□□□ 0.03
HLCSP50747 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.25■□□□□ 0.03
HLCSP50747 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.25■□□□□ 0.03
HLCSP50747 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
HLCSP50747 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLCSP50747 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
HLCSP50747 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLCSP50747 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLCSP50747 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLCSP50747 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLCSP50747 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLCSP50747 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.25■□□□□ 0.03
HLCSP50747 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLCSP50747 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.25■□□□□ 0.03
HLCSP50747 AC136621.1-201ENST00000624017 2304 ntBASIC15.25■□□□□ 0.03
HLCSP50747 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
HLCSP50747 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLCSP50747 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.24■□□□□ 0.03
HLCSP50747 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLCSP50747 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLCSP50747 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.24■□□□□ 0.03
HLCSP50747 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLCSP50747 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HLCSP50747 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLCSP50747 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLCSP50747 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.24■□□□□ 0.03
HLCSP50747 AC005089.1-201ENST00000619486 2241 ntBASIC15.24■□□□□ 0.03
HLCSP50747 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLCSP50747 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.24■□□□□ 0.03
HLCSP50747 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLCSP50747 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLCSP50747 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLCSP50747 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLCSP50747 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLCSP50747 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.24■□□□□ 0.03
HLCSP50747 TMBIM7P-203ENST00000641617 1718 ntBASIC15.24■□□□□ 0.03
HLCSP50747 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLCSP50747 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.24■□□□□ 0.03
HLCSP50747 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLCSP50747 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLCSP50747 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLCSP50747 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.24■□□□□ 0.03
HLCSP50747 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.24■□□□□ 0.03
HLCSP50747 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HLCSP50747 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.24■□□□□ 0.03
HLCSP50747 AL138918.1-201ENST00000568306 659 ntBASIC15.24■□□□□ 0.03
HLCSP50747 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.24■□□□□ 0.03
HLCSP50747 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.24■□□□□ 0.03
HLCSP50747 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLCSP50747 Z92544.3-201ENST00000624747 417 ntBASIC15.24■□□□□ 0.03
HLCSP50747 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLCSP50747 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.24■□□□□ 0.03
HLCSP50747 AL671710.1-201ENST00000610245 2349 ntBASIC15.24■□□□□ 0.03
HLCSP50747 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLCSP50747 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.24■□□□□ 0.03
HLCSP50747 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.24■□□□□ 0.03
HLCSP50747 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLCSP50747 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
HLCSP50747 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
HLCSP50747 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLCSP50747 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.24■□□□□ 0.03
HLCSP50747 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLCSP50747 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLCSP50747 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLCSP50747 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLCSP50747 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLCSP50747 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLCSP50747 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLCSP50747 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.23■□□□□ 0.03
HLCSP50747 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLCSP50747 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.23■□□□□ 0.03
HLCSP50747 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLCSP50747 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLCSP50747 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLCSP50747 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.23■□□□□ 0.03
HLCSP50747 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HLCSP50747 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLCSP50747 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
HLCSP50747 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HLCSP50747 REXO1L8P-201ENST00000604378 1897 ntBASIC15.23■□□□□ 0.03
HLCSP50747 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
HLCSP50747 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HLCSP50747 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HLCSP50747 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.23■□□□□ 0.03
HLCSP50747 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
HLCSP50747 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.23■□□□□ 0.03
HLCSP50747 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.23■□□□□ 0.03
HLCSP50747 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.23■□□□□ 0.03
HLCSP50747 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLCSP50747 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.23■□□□□ 0.03
HLCSP50747 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.23■□□□□ 0.03
HLCSP50747 AC105233.2-201ENST00000523697 349 ntBASIC15.23■□□□□ 0.03
HLCSP50747 AF228730.5-201ENST00000530288 346 ntBASIC15.23■□□□□ 0.03
HLCSP50747 AC069262.1-201ENST00000539058 672 ntBASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms