Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRIM2P49643 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PRIM2P49643 TFAMP1-201ENST00000412727 736 ntBASIC15.18■□□□□ 0.02
PRIM2P49643 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.18■□□□□ 0.02
PRIM2P49643 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.18■□□□□ 0.02
PRIM2P49643 MCCD1P2-201ENST00000423228 335 ntBASIC15.18■□□□□ 0.02
PRIM2P49643 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.18■□□□□ 0.02
PRIM2P49643 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.18■□□□□ 0.02
PRIM2P49643 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.18■□□□□ 0.02
PRIM2P49643 RN7SL589P-201ENST00000481268 310 ntBASIC15.18■□□□□ 0.02
PRIM2P49643 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.18■□□□□ 0.02
PRIM2P49643 PGAM5P1-201ENST00000518923 814 ntBASIC15.18■□□□□ 0.02
PRIM2P49643 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.18■□□□□ 0.02
PRIM2P49643 AC105233.2-201ENST00000523697 349 ntBASIC15.18■□□□□ 0.02
PRIM2P49643 AF228730.5-201ENST00000530288 346 ntBASIC15.18■□□□□ 0.02
PRIM2P49643 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.18■□□□□ 0.02
PRIM2P49643 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PRIM2P49643 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.18■□□□□ 0.02
PRIM2P49643 AC073389.1-201ENST00000595595 795 ntBASIC15.18■□□□□ 0.02
PRIM2P49643 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
PRIM2P49643 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRIM2P49643 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRIM2P49643 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PRIM2P49643 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRIM2P49643 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRIM2P49643 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRIM2P49643 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRIM2P49643 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRIM2P49643 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.18■□□□□ 0.02
PRIM2P49643 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRIM2P49643 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRIM2P49643 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.17■□□□□ 0.02
PRIM2P49643 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRIM2P49643 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.17■□□□□ 0.02
PRIM2P49643 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.17■□□□□ 0.02
PRIM2P49643 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.17■□□□□ 0.02
PRIM2P49643 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PRIM2P49643 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.17■□□□□ 0.02
PRIM2P49643 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PRIM2P49643 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.17■□□□□ 0.02
PRIM2P49643 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PRIM2P49643 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRIM2P49643 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.17■□□□□ 0.02
PRIM2P49643 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRIM2P49643 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRIM2P49643 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRIM2P49643 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.17■□□□□ 0.02
PRIM2P49643 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.17■□□□□ 0.02
PRIM2P49643 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PRIM2P49643 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRIM2P49643 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRIM2P49643 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
PRIM2P49643 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRIM2P49643 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRIM2P49643 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.17■□□□□ 0.02
PRIM2P49643 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.17■□□□□ 0.02
PRIM2P49643 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.17■□□□□ 0.02
PRIM2P49643 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.17■□□□□ 0.02
PRIM2P49643 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.17■□□□□ 0.02
PRIM2P49643 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.17■□□□□ 0.02
PRIM2P49643 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.17■□□□□ 0.02
PRIM2P49643 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.17■□□□□ 0.02
PRIM2P49643 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.17■□□□□ 0.02
PRIM2P49643 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PRIM2P49643 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRIM2P49643 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.17■□□□□ 0.02
PRIM2P49643 AL135744.1-201ENST00000565098 629 ntBASIC15.17■□□□□ 0.02
PRIM2P49643 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.17■□□□□ 0.02
PRIM2P49643 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.17■□□□□ 0.02
PRIM2P49643 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
PRIM2P49643 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRIM2P49643 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PRIM2P49643 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PRIM2P49643 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRIM2P49643 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.17■□□□□ 0.02
PRIM2P49643 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PRIM2P49643 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRIM2P49643 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRIM2P49643 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PRIM2P49643 AC011477.6-201ENST00000604980 1927 ntBASIC15.17■□□□□ 0.02
PRIM2P49643 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PRIM2P49643 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
PRIM2P49643 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.17■□□□□ 0.02
PRIM2P49643 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRIM2P49643 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRIM2P49643 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
PRIM2P49643 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
PRIM2P49643 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PRIM2P49643 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRIM2P49643 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PRIM2P49643 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRIM2P49643 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PRIM2P49643 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRIM2P49643 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PRIM2P49643 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRIM2P49643 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRIM2P49643 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRIM2P49643 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.16■□□□□ 0.02
PRIM2P49643 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRIM2P49643 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms