Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A12P48065 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A12P48065 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SLC6A12P48065 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC6A12P48065 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SLC6A12P48065 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SLC6A12P48065 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SLC6A12P48065 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A12P48065 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
SLC6A12P48065 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC6A12P48065 C18orf15-201ENST00000623680 2534 ntBASIC15.28■□□□□ 0.04
SLC6A12P48065 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC6A12P48065 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A12P48065 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC6A12P48065 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A12P48065 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A12P48065 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A12P48065 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A12P48065 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A12P48065 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SLC6A12P48065 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC6A12P48065 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A12P48065 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC6A12P48065 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
SLC6A12P48065 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A12P48065 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A12P48065 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A12P48065 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A12P48065 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A12P48065 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC6A12P48065 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC6A12P48065 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC6A12P48065 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC6A12P48065 AL512361.1-201ENST00000554200 418 ntBASIC15.28■□□□□ 0.04
SLC6A12P48065 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SLC6A12P48065 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC6A12P48065 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.28■□□□□ 0.04
SLC6A12P48065 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A12P48065 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC6A12P48065 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A12P48065 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A12P48065 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A12P48065 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A12P48065 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC6A12P48065 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC6A12P48065 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A12P48065 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A12P48065 AC138035.3-201ENST00000622706 2791 ntBASIC15.28■□□□□ 0.04
SLC6A12P48065 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A12P48065 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC6A12P48065 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC6A12P48065 AC023157.3-201ENST00000619086 2088 ntBASIC15.28■□□□□ 0.04
SLC6A12P48065 LINC00554-201ENST00000564841 3011 ntBASIC15.27■□□□□ 0.04
SLC6A12P48065 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A12P48065 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A12P48065 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC6A12P48065 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A12P48065 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC6A12P48065 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A12P48065 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC6A12P48065 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
SLC6A12P48065 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A12P48065 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A12P48065 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC6A12P48065 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SLC6A12P48065 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.27■□□□□ 0.04
SLC6A12P48065 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A12P48065 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A12P48065 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC6A12P48065 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A12P48065 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A12P48065 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A12P48065 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A12P48065 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC6A12P48065 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.27■□□□□ 0.04
SLC6A12P48065 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.27■□□□□ 0.04
SLC6A12P48065 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A12P48065 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.27■□□□□ 0.04
SLC6A12P48065 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.27■□□□□ 0.04
SLC6A12P48065 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.27■□□□□ 0.04
SLC6A12P48065 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.27■□□□□ 0.04
SLC6A12P48065 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A12P48065 AC140878.1-201ENST00000565277 250 ntBASIC15.27■□□□□ 0.04
SLC6A12P48065 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.27■□□□□ 0.04
SLC6A12P48065 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A12P48065 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.27■□□□□ 0.04
SLC6A12P48065 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.27■□□□□ 0.04
SLC6A12P48065 AC093028.1-201ENST00000622998 982 ntBASIC15.27■□□□□ 0.04
SLC6A12P48065 AC073592.8-201ENST00000624126 511 ntBASIC15.27■□□□□ 0.04
SLC6A12P48065 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC6A12P48065 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SLC6A12P48065 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC6A12P48065 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
SLC6A12P48065 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLC6A12P48065 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC6A12P48065 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLC6A12P48065 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC6A12P48065 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLC6A12P48065 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC6A12P48065 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms