Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
CLCN1P35523 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLCN1P35523 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CLCN1P35523 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN1P35523 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN1P35523 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CLCN1P35523 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN1P35523 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN1P35523 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN1P35523 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN1P35523 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN1P35523 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CLCN1P35523 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.14■□□□□ 0.49
CLCN1P35523 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.14■□□□□ 0.49
CLCN1P35523 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.14■□□□□ 0.49
CLCN1P35523 AC079781.3-201ENST00000449110 356 ntBASIC18.14■□□□□ 0.49
CLCN1P35523 FAM197Y8-203ENST00000450145 560 ntBASIC18.14■□□□□ 0.49
CLCN1P35523 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.14■□□□□ 0.49
CLCN1P35523 OR7E14P-202ENST00000530490 1290 ntBASIC18.14■□□□□ 0.49
CLCN1P35523 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.14■□□□□ 0.49
CLCN1P35523 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC18.14■□□□□ 0.49
CLCN1P35523 AC013467.2-201ENST00000605472 835 ntBASIC18.14■□□□□ 0.49
CLCN1P35523 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.14■□□□□ 0.49
CLCN1P35523 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.14■□□□□ 0.49
CLCN1P35523 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.14■□□□□ 0.49
CLCN1P35523 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.14■□□□□ 0.49
CLCN1P35523 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC18.14■□□□□ 0.49
CLCN1P35523 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CLCN1P35523 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.14■□□□□ 0.49
CLCN1P35523 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.14■□□□□ 0.49
CLCN1P35523 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CLCN1P35523 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN1P35523 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CLCN1P35523 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN1P35523 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN1P35523 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN1P35523 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN1P35523 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CLCN1P35523 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN1P35523 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN1P35523 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN1P35523 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CLCN1P35523 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.13■□□□□ 0.49
CLCN1P35523 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN1P35523 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.13■□□□□ 0.49
CLCN1P35523 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN1P35523 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN1P35523 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN1P35523 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC18.13■□□□□ 0.49
CLCN1P35523 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC18.13■□□□□ 0.49
CLCN1P35523 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.13■□□□□ 0.49
CLCN1P35523 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.13■□□□□ 0.49
CLCN1P35523 AC018712.1-201ENST00000455767 687 ntBASIC18.13■□□□□ 0.49
CLCN1P35523 POU5F1P6-201ENST00000466990 990 ntBASIC18.13■□□□□ 0.49
CLCN1P35523 RN7SL510P-201ENST00000581311 263 ntBASIC18.13■□□□□ 0.49
CLCN1P35523 AC006557.2-201ENST00000592985 1240 ntBASIC18.13■□□□□ 0.49
CLCN1P35523 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.13■□□□□ 0.49
CLCN1P35523 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CLCN1P35523 AC148477.8-201ENST00000624298 468 ntBASIC18.13■□□□□ 0.49
CLCN1P35523 AL805961.1-202ENST00000641562 540 ntBASIC18.13■□□□□ 0.49
CLCN1P35523 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CLCN1P35523 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN1P35523 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.13■□□□□ 0.49
CLCN1P35523 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN1P35523 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC18.13■□□□□ 0.49
CLCN1P35523 BX640514.1-201ENST00000583223 1918 ntBASIC18.13■□□□□ 0.49
CLCN1P35523 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
CLCN1P35523 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN1P35523 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN1P35523 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN1P35523 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CLCN1P35523 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CLCN1P35523 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC18.13■□□□□ 0.49
CLCN1P35523 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN1P35523 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN1P35523 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN1P35523 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC18.12■□□□□ 0.49
CLCN1P35523 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
CLCN1P35523 PKD1P5-201ENST00000532415 10291 ntBASIC18.12■□□□□ 0.49
CLCN1P35523 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.12■□□□□ 0.49
CLCN1P35523 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.12■□□□□ 0.49
CLCN1P35523 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN1P35523 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN1P35523 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN1P35523 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN1P35523 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN1P35523 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CLCN1P35523 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN1P35523 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN1P35523 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN1P35523 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN1P35523 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.12■□□□□ 0.49
CLCN1P35523 AC087163.2-201ENST00000457299 853 ntBASIC18.12■□□□□ 0.49
CLCN1P35523 AC073648.2-201ENST00000510116 352 ntBASIC18.12■□□□□ 0.49
CLCN1P35523 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC18.12■□□□□ 0.49
CLCN1P35523 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.12■□□□□ 0.49
CLCN1P35523 AC012640.2-201ENST00000561606 901 ntBASIC18.12■□□□□ 0.49
CLCN1P35523 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN1P35523 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.12■□□□□ 0.49
CLCN1P35523 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms