Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TM4SF1P30408 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC19.39■□□□□ 0.69
TM4SF1P30408 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
TM4SF1P30408 AP001505.2-201ENST00000616815 443 ntBASIC19.39■□□□□ 0.69
TM4SF1P30408 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC19.39■□□□□ 0.69
TM4SF1P30408 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC19.39■□□□□ 0.69
TM4SF1P30408 AC128714.1-201ENST00000637035 887 ntBASIC19.39■□□□□ 0.69
TM4SF1P30408 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.39■□□□□ 0.69
TM4SF1P30408 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC19.39■□□□□ 0.69
TM4SF1P30408 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TM4SF1P30408 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TM4SF1P30408 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TM4SF1P30408 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
TM4SF1P30408 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
TM4SF1P30408 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TM4SF1P30408 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC19.39■□□□□ 0.69
TM4SF1P30408 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TM4SF1P30408 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
TM4SF1P30408 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TM4SF1P30408 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TM4SF1P30408 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.39■□□□□ 0.69
TM4SF1P30408 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.39■□□□□ 0.69
TM4SF1P30408 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TM4SF1P30408 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TM4SF1P30408 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TM4SF1P30408 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TM4SF1P30408 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TM4SF1P30408 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TM4SF1P30408 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TM4SF1P30408 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TM4SF1P30408 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
TM4SF1P30408 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TM4SF1P30408 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
TM4SF1P30408 PTPA-217ENST00000434095 870 ntTSL 2 BASIC19.38■□□□□ 0.69
TM4SF1P30408 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC19.38■□□□□ 0.69
TM4SF1P30408 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TM4SF1P30408 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.38■□□□□ 0.69
TM4SF1P30408 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TM4SF1P30408 RN7SL774P-201ENST00000577467 290 ntBASIC19.38■□□□□ 0.69
TM4SF1P30408 AC138649.2-201ENST00000615886 705 ntBASIC19.38■□□□□ 0.69
TM4SF1P30408 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TM4SF1P30408 CU633904.3-201ENST00000624042 1029 ntBASIC19.38■□□□□ 0.69
TM4SF1P30408 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TM4SF1P30408 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.38■□□□□ 0.69
TM4SF1P30408 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TM4SF1P30408 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF1P30408 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TM4SF1P30408 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF1P30408 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF1P30408 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TM4SF1P30408 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF1P30408 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF1P30408 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF1P30408 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF1P30408 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TM4SF1P30408 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC19.37■□□□□ 0.69
TM4SF1P30408 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF1P30408 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.37■□□□□ 0.69
TM4SF1P30408 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TM4SF1P30408 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF1P30408 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TM4SF1P30408 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF1P30408 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF1P30408 MIR33B-201ENST00000385104 96 ntBASIC19.37■□□□□ 0.69
TM4SF1P30408 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF1P30408 FAM8A4P-201ENST00000435433 1213 ntBASIC19.37■□□□□ 0.69
TM4SF1P30408 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC19.37■□□□□ 0.69
TM4SF1P30408 AC253536.4-201ENST00000440539 267 ntBASIC19.37■□□□□ 0.69
TM4SF1P30408 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF1P30408 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF1P30408 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC19.37■□□□□ 0.69
TM4SF1P30408 AC245884.6-201ENST00000515672 1067 ntBASIC19.37■□□□□ 0.69
TM4SF1P30408 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF1P30408 SDHD-202ENST00000525291 790 ntTSL 3 BASIC19.37■□□□□ 0.69
TM4SF1P30408 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC19.37■□□□□ 0.69
TM4SF1P30408 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
TM4SF1P30408 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC19.37■□□□□ 0.69
TM4SF1P30408 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC19.37■□□□□ 0.69
TM4SF1P30408 MIR5572-201ENST00000583188 137 ntBASIC19.37■□□□□ 0.69
TM4SF1P30408 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC19.37■□□□□ 0.69
TM4SF1P30408 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC19.37■□□□□ 0.69
TM4SF1P30408 AC025181.2-201ENST00000606994 802 ntBASIC19.37■□□□□ 0.69
TM4SF1P30408 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF1P30408 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TM4SF1P30408 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF1P30408 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
TM4SF1P30408 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF1P30408 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF1P30408 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.37■□□□□ 0.69
TM4SF1P30408 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF1P30408 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF1P30408 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.37■□□□□ 0.69
TM4SF1P30408 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TM4SF1P30408 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TM4SF1P30408 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TM4SF1P30408 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TM4SF1P30408 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TM4SF1P30408 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC19.36■□□□□ 0.69
TM4SF1P30408 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TM4SF1P30408 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms