Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DPA1P20036 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DPA1P20036 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.04■□□□□ 0.16
HLA-DPA1P20036 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.04■□□□□ 0.16
HLA-DPA1P20036 HNRNPUP1-201ENST00000554987 333 ntBASIC16.04■□□□□ 0.16
HLA-DPA1P20036 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.04■□□□□ 0.16
HLA-DPA1P20036 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.04■□□□□ 0.16
HLA-DPA1P20036 MIR4313-201ENST00000580760 101 ntBASIC16.04■□□□□ 0.16
HLA-DPA1P20036 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.04■□□□□ 0.16
HLA-DPA1P20036 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.04■□□□□ 0.16
HLA-DPA1P20036 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DPA1P20036 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.04■□□□□ 0.16
HLA-DPA1P20036 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DPA1P20036 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DPA1P20036 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DPA1P20036 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.04■□□□□ 0.16
HLA-DPA1P20036 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DPA1P20036 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DPA1P20036 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.04■□□□□ 0.16
HLA-DPA1P20036 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DPA1P20036 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DPA1P20036 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
HLA-DPA1P20036 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HLA-DPA1P20036 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.04■□□□□ 0.16
HLA-DPA1P20036 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.04■□□□□ 0.16
HLA-DPA1P20036 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.04■□□□□ 0.16
HLA-DPA1P20036 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DPA1P20036 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DPA1P20036 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DPA1P20036 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.03■□□□□ 0.16
HLA-DPA1P20036 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DPA1P20036 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DPA1P20036 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DPA1P20036 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.03■□□□□ 0.16
HLA-DPA1P20036 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.03■□□□□ 0.16
HLA-DPA1P20036 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DPA1P20036 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DPA1P20036 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
HLA-DPA1P20036 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.03■□□□□ 0.16
HLA-DPA1P20036 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DPA1P20036 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
HLA-DPA1P20036 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DPA1P20036 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.03■□□□□ 0.16
HLA-DPA1P20036 AC136604.1-201ENST00000418535 575 ntBASIC16.03■□□□□ 0.16
HLA-DPA1P20036 AL080243.2-201ENST00000418783 582 ntBASIC16.03■□□□□ 0.16
HLA-DPA1P20036 HIST3H2BA-201ENST00000436555 524 ntBASIC16.03■□□□□ 0.16
HLA-DPA1P20036 SERBP1P3-201ENST00000459980 809 ntBASIC16.03■□□□□ 0.16
HLA-DPA1P20036 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.03■□□□□ 0.16
HLA-DPA1P20036 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.03■□□□□ 0.16
HLA-DPA1P20036 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.03■□□□□ 0.16
HLA-DPA1P20036 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.03■□□□□ 0.16
HLA-DPA1P20036 AC051619.7-201ENST00000568314 623 ntBASIC16.03■□□□□ 0.16
HLA-DPA1P20036 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.03■□□□□ 0.16
HLA-DPA1P20036 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.03■□□□□ 0.16
HLA-DPA1P20036 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.03■□□□□ 0.16
HLA-DPA1P20036 AC093028.1-201ENST00000622998 982 ntBASIC16.03■□□□□ 0.16
HLA-DPA1P20036 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DPA1P20036 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
HLA-DPA1P20036 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DPA1P20036 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.03■□□□□ 0.16
HLA-DPA1P20036 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.03■□□□□ 0.16
HLA-DPA1P20036 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.03■□□□□ 0.16
HLA-DPA1P20036 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DPA1P20036 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HLA-DPA1P20036 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DPA1P20036 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.02■□□□□ 0.16
HLA-DPA1P20036 FO538757.1-201ENST00000623083 1397 ntBASIC16.02■□□□□ 0.16
HLA-DPA1P20036 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
HLA-DPA1P20036 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.02■□□□□ 0.16
HLA-DPA1P20036 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.02■□□□□ 0.16
HLA-DPA1P20036 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.02■□□□□ 0.16
HLA-DPA1P20036 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DPA1P20036 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.02■□□□□ 0.16
HLA-DPA1P20036 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DPA1P20036 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
HLA-DPA1P20036 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DPA1P20036 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DPA1P20036 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DPA1P20036 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
HLA-DPA1P20036 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.02■□□□□ 0.16
HLA-DPA1P20036 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HLA-DPA1P20036 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.02■□□□□ 0.16
HLA-DPA1P20036 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.02■□□□□ 0.16
HLA-DPA1P20036 FAM86GP-201ENST00000448322 971 ntBASIC16.02■□□□□ 0.16
HLA-DPA1P20036 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.02■□□□□ 0.16
HLA-DPA1P20036 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.02■□□□□ 0.16
HLA-DPA1P20036 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.02■□□□□ 0.16
HLA-DPA1P20036 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.02■□□□□ 0.16
HLA-DPA1P20036 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.02■□□□□ 0.16
HLA-DPA1P20036 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.02■□□□□ 0.16
HLA-DPA1P20036 AC140878.1-201ENST00000565277 250 ntBASIC16.02■□□□□ 0.16
HLA-DPA1P20036 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.02■□□□□ 0.16
HLA-DPA1P20036 AC097359.3-201ENST00000603982 1210 ntBASIC16.02■□□□□ 0.16
HLA-DPA1P20036 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.02■□□□□ 0.15
HLA-DPA1P20036 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.02■□□□□ 0.15
HLA-DPA1P20036 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HLA-DPA1P20036 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
HLA-DPA1P20036 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HLA-DPA1P20036 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.02■□□□□ 0.15
HLA-DPA1P20036 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms