Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NCLP19338 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NCLP19338 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.03■□□□□ 0.64
NCLP19338 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.03■□□□□ 0.64
NCLP19338 AL591424.1-201ENST00000442569 1213 ntBASIC19.03■□□□□ 0.64
NCLP19338 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NCLP19338 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NCLP19338 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.03■□□□□ 0.64
NCLP19338 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.03■□□□□ 0.64
NCLP19338 AC140113.2-201ENST00000604370 208 ntBASIC19.03■□□□□ 0.64
NCLP19338 AC020765.3-201ENST00000613051 740 ntBASIC19.03■□□□□ 0.64
NCLP19338 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.03■□□□□ 0.64
NCLP19338 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NCLP19338 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC19.03■□□□□ 0.64
NCLP19338 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NCLP19338 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NCLP19338 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NCLP19338 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
NCLP19338 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NCLP19338 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.03■□□□□ 0.64
NCLP19338 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NCLP19338 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NCLP19338 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
NCLP19338 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
NCLP19338 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NCLP19338 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
NCLP19338 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
NCLP19338 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.02■□□□□ 0.64
NCLP19338 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NCLP19338 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NCLP19338 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NCLP19338 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC19.02■□□□□ 0.64
NCLP19338 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
NCLP19338 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NCLP19338 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.02■□□□□ 0.64
NCLP19338 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.02■□□□□ 0.64
NCLP19338 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.02■□□□□ 0.64
NCLP19338 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NCLP19338 HCG4-201ENST00000418983 998 ntBASIC19.02■□□□□ 0.64
NCLP19338 AC136632.2-201ENST00000512891 861 ntBASIC19.02■□□□□ 0.64
NCLP19338 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.02■□□□□ 0.64
NCLP19338 PGAM5P1-201ENST00000518923 814 ntBASIC19.02■□□□□ 0.64
NCLP19338 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.02■□□□□ 0.64
NCLP19338 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.02■□□□□ 0.64
NCLP19338 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
NCLP19338 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NCLP19338 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.02■□□□□ 0.64
NCLP19338 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.02■□□□□ 0.64
NCLP19338 AC005593.1-201ENST00000624894 515 ntBASIC19.02■□□□□ 0.64
NCLP19338 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
NCLP19338 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
NCLP19338 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NCLP19338 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
NCLP19338 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NCLP19338 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NCLP19338 AC005622.1-201ENST00000636801 1703 ntBASIC19.02■□□□□ 0.63
NCLP19338 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC19.02■□□□□ 0.63
NCLP19338 GSN-203ENST00000373808 2664 ntTSL 2 BASIC19.02■□□□□ 0.63
NCLP19338 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.02■□□□□ 0.63
NCLP19338 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
NCLP19338 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
NCLP19338 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
NCLP19338 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NCLP19338 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NCLP19338 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NCLP19338 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NCLP19338 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.01■□□□□ 0.63
NCLP19338 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NCLP19338 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NCLP19338 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.01■□□□□ 0.63
NCLP19338 MED15P5-201ENST00000423150 992 ntBASIC19.01■□□□□ 0.63
NCLP19338 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
NCLP19338 AC009947.1-201ENST00000444350 727 ntBASIC19.01■□□□□ 0.63
NCLP19338 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
NCLP19338 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NCLP19338 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NCLP19338 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NCLP19338 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC19.01■□□□□ 0.63
NCLP19338 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
NCLP19338 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
NCLP19338 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NCLP19338 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NCLP19338 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.01■□□□□ 0.63
NCLP19338 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.01■□□□□ 0.63
NCLP19338 AC016027.1-202ENST00000607927 1699 ntBASIC19.01■□□□□ 0.63
NCLP19338 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC19■□□□□ 0.63
NCLP19338 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NCLP19338 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
NCLP19338 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19■□□□□ 0.63
NCLP19338 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC19■□□□□ 0.63
NCLP19338 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19■□□□□ 0.63
NCLP19338 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19■□□□□ 0.63
NCLP19338 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC19■□□□□ 0.63
NCLP19338 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
NCLP19338 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
NCLP19338 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19■□□□□ 0.63
NCLP19338 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NCLP19338 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
NCLP19338 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC19■□□□□ 0.63
NCLP19338 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms