Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC1P18887 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC1P18887 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC1P18887 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC1P18887 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC1P18887 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC1P18887 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC1P18887 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC1P18887 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC1P18887 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC1P18887 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
XRCC1P18887 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC1P18887 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
XRCC1P18887 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.89■□□□□ 0.13
XRCC1P18887 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
XRCC1P18887 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
XRCC1P18887 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
XRCC1P18887 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
XRCC1P18887 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC1P18887 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.88■□□□□ 0.13
XRCC1P18887 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.88■□□□□ 0.13
XRCC1P18887 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.88■□□□□ 0.13
XRCC1P18887 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
XRCC1P18887 AC005622.1-201ENST00000636801 1703 ntBASIC15.88■□□□□ 0.13
XRCC1P18887 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC1P18887 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC1P18887 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC1P18887 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.88■□□□□ 0.13
XRCC1P18887 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
XRCC1P18887 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC1P18887 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC1P18887 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC1P18887 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
XRCC1P18887 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC1P18887 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC1P18887 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
XRCC1P18887 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC1P18887 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC1P18887 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC1P18887 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.88■□□□□ 0.13
XRCC1P18887 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
XRCC1P18887 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.88■□□□□ 0.13
XRCC1P18887 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.88■□□□□ 0.13
XRCC1P18887 AC061975.2-201ENST00000581722 295 ntBASIC15.88■□□□□ 0.13
XRCC1P18887 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC1P18887 AC092364.2-202ENST00000597012 1073 ntBASIC15.88■□□□□ 0.13
XRCC1P18887 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC1P18887 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.88■□□□□ 0.13
XRCC1P18887 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.88■□□□□ 0.13
XRCC1P18887 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC1P18887 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC1P18887 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC1P18887 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC1P18887 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
XRCC1P18887 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC1P18887 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.88■□□□□ 0.13
XRCC1P18887 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC1P18887 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC1P18887 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC1P18887 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
XRCC1P18887 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
XRCC1P18887 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC1P18887 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
XRCC1P18887 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC1P18887 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.87■□□□□ 0.13
XRCC1P18887 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC1P18887 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.87■□□□□ 0.13
XRCC1P18887 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.87■□□□□ 0.13
XRCC1P18887 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.87■□□□□ 0.13
XRCC1P18887 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC1P18887 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
XRCC1P18887 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC1P18887 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC1P18887 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC1P18887 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC1P18887 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC1P18887 U82695.1-201ENST00000635752 1889 ntBASIC15.87■□□□□ 0.13
XRCC1P18887 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC1P18887 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC1P18887 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.87■□□□□ 0.13
XRCC1P18887 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.87■□□□□ 0.13
XRCC1P18887 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC1P18887 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.87■□□□□ 0.13
XRCC1P18887 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
XRCC1P18887 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC1P18887 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
XRCC1P18887 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.87■□□□□ 0.13
XRCC1P18887 FAM8A3P-201ENST00000427218 844 ntBASIC15.87■□□□□ 0.13
XRCC1P18887 AC092580.3-201ENST00000430932 139 ntBASIC15.87■□□□□ 0.13
XRCC1P18887 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.87■□□□□ 0.13
XRCC1P18887 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.87■□□□□ 0.13
XRCC1P18887 POU5F1P6-201ENST00000466990 990 ntBASIC15.87■□□□□ 0.13
XRCC1P18887 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.87■□□□□ 0.13
XRCC1P18887 IGHV3-42-201ENST00000520410 361 ntBASIC15.87■□□□□ 0.13
XRCC1P18887 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.87■□□□□ 0.13
XRCC1P18887 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.87■□□□□ 0.13
XRCC1P18887 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.87■□□□□ 0.13
XRCC1P18887 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
XRCC1P18887 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.87■□□□□ 0.13
XRCC1P18887 RN7SL828P-201ENST00000607615 303 ntBASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms